Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03391 ATGCCAAGTCCTGGGGTTGAAGGAGCACAAGCAGTAGCAATCAGAATATCAGGAGATCAAGCTGAATTCAAGGGTTGTGGATTCTTTGGAGCACAAGACACCCTTCATGATGATAAGGGTCGCCATTACTTCAGGGATTGCTATATCCAAGGCTCAATTGATTTCATATTTGGCGATGGAAGGTCCTTTTACGAGAATTGTGAAATAGTTTCTATAGCGAATCCAGTGCCACAAGGATACAGGAGCATAAATGGTGCAGTGACAGCTCATGGAAGAGTATCCATGGATGATAACACAGGATTTGTGTTTGTGAACAGCACAATAGGAGGGAGTGGGAGAATATGGTTAGGAAGGGCATGGAGACCATACTCACGTGTTGTTTTTGTGTCAACAACAATGTCAGATATCATTGCCCCTGAAGGTTGGAACGATTTCAATGACCCTTCAAGGGATCAGACCATATTCTATGGAGAGTACAATTGCTCTGGTCCCGGAGCTAGCATGGCAATGAGGGCACCATATGTGCAGAGATTAAACGATACACAAGCTCTTCCATTCCTCAACATAACTTTTATTGATGGTGACCAATGGTTGGAAAATTACACACAATTAATAACCTAA 621 0.4283 MPSPGVEGAQAVAIRISGDQAEFKGCGFFGAQDTLHDDKGRHYFRDCYIQGSIDFIFGDGRSFYENCEIVSIANPVPQGYRSINGAVTAHGRVSMDDNTGFVFVNSTIGGSGRIWLGRAWRPYSRVVFVSTTMSDIIAPEGWNDFNDPSRDQTIFYGEYNCSGPGASMAMRAPYVQRLNDTQALPFLNITFIDGDQWLENYTQLIT 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03391 206 Pfam Pectinesterase 5 195 IPR000070 GO:0030599|GO:0042545
Adu05g03391 206 PANTHER PECTINESTERASE 8-RELATED 1 201 - -
Adu05g03391 206 Gene3D - 3 205 IPR012334 -
Adu05g03391 206 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 201 - -
Adu05g03391 206 SUPERFAMILY Pectin lyase-like 5 199 IPR011050 -
Adu05g03391 206 ProSitePatterns Pectinesterase signature 2. 49 58 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03391 Adu-Chr5 106330772 106331576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03391 1 199 Carbohydrate Esterase AT1G05310 72.362 1.70e-112 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03391 - - ahf:112696095 434.876