Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03340 ATGGCTCAACCTCACCCCAATCATCTCACATGGATTCACCTTCACCTCATCCTCCTCTTCCTCCTCCATGGTAGTCATAGTGTAGTTCATGCACAAGGTTCCATGGAGCCAGTTCCCACAGACATCTCCCACCACAGTTGGCAACCTTCTTTTGCAATCACCATAGGTGCCATCATCTGTGCCTTCCTCTTCATGGGGATCATCACAGTCTACCTTCGTAACTGTACTGGTTCACACATCAACAACAGAAACCAAACCAACCAAACCTCCTCAGAATGTTCATGTTCTTGTTCACAAGGGATCACTAAGGAACTCCTCAACACTTTCCCAATCCTCTTCTACCCCACCATCAAGGACCTCAAGATAGGTAAAGCATCATTGGAATGTGCAATTTGCTTAACTGATTTCAAGGACTATGACACACTGAGGCTTCTACCAAAGTGCGACCATGTCTTTCACCCTCAATGCATAGACTCATGGCTATGTTCCCATGTCACGTGCCCGGTTTGTCGCGCGAATCTGAACCAAGATACATGCGAAATTGCCATAACTGTTCCGACCCAATTTAGCACTCCCCAAAGTGGTGAAGAAAGTCTAGGACTTGAAGCTGAAAACAACGGTGGTGAAGAGCACAACGCGGTGGAACAAAACCATGTCGAGAAAAACGAGGTTTTGAACAGCAACGATGGTGGTGGTGGTGGTGGTGAAGGTGATGGTGGTAGTGATGGGGTTGTGTCAAAACCGAAGCTTTTGAAGTCAAATTCAACGGGACACACGGTTGTGGAGCAAGTGAAGAGCGAGGAGAGGTACACACTGAGGTTACCGGAAGATGTGAGGAGGTACATTCTGGTGAACCATGGTGAAACGGTGCAGCGTTCCTCCAGCTACAACAACAACAATGGCAACAACGTGGTGAGAGGGGTGTGTTGGAGTGAGATTGAAGAGAGCAGCGGTGGTGGTAAGAGAAGCAACAATGGTGAGGTGAAGGTGGAGAGGTGGGTGCTTTGTAGCCGTGGTTGA 1020 0.4833 MAQPHPNHLTWIHLHLILLFLLHGSHSVVHAQGSMEPVPTDISHHSWQPSFAITIGAIICAFLFMGIITVYLRNCTGSHINNRNQTNQTSSECSCSCSQGITKELLNTFPILFYPTIKDLKIGKASLECAICLTDFKDYDTLRLLPKCDHVFHPQCIDSWLCSHVTCPVCRANLNQDTCEIAITVPTQFSTPQSGEESLGLEAENNGGEEHNAVEQNHVEKNEVLNSNDGGGGGGEGDGGSDGVVSKPKLLKSNSTGHTVVEQVKSEERYTLRLPEDVRRYILVNHGETVQRSSSYNNNNGNNVVRGVCWSEIEESSGGGKRSNNGEVKVERWVLCSRG 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03340 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 180 IPR013083 -
Adu05g03340 339 Pfam Ring finger domain 128 171 IPR001841 -
Adu05g03340 339 PANTHER RING FINGER DOMAIN-CONTAINING 234 305 - -
Adu05g03340 339 PANTHER RING FINGER DOMAIN-CONTAINING 8 216 - -
Adu05g03340 339 CDD RING-H2_EL5_like 128 171 - -
Adu05g03340 339 ProSiteProfiles Zinc finger RING-type profile. 129 171 IPR001841 -
Adu05g03340 339 MobiDBLite consensus disorder prediction 223 258 - -
Adu05g03340 339 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 8 216 - -
Adu05g03340 339 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 234 305 - -
Adu05g03340 339 SUPERFAMILY RING/U-box 128 177 - -
Adu05g03340 339 SMART ring_2 129 170 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03340 Adu-Chr5 105849387 105851179 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03340 7 283 Rapid Response to Elicitors AT3G05200 33.922 1.33e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03340 K10664 - gmx:100782532 302.753