Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03339 ATGAATTTCCTCAGGTACTGCCACGTCATCACCACCATCTTCCTTCTATCAGTACCCAACATTACTGCTCAATTGGCGGCTCCGTCAGCTCACCGACCAGTAGTCACCCAAAACAACGACGGAAACCCTTCGATTGCGATTGTTCTCGTCGTTCTCATCTTCGCATTCTTCATGACTGGCTTCTGCGCCGTCTACATTCGCCACTGCAATGAAAGCTACGTCGTTCAGGGAGCTGCCGCTGCCAACGCCGCCACTGCTCCACGTGGCGTCGATCCGGAGGTGCTCTCCACGTTCCCAATTATGGTTTATTCCACCGTGAAGCACCTCAAAACGGGTCACAGTGCGTCGCTTCAGTGCGCTGTGTGCTTGAGCGAGTTCAAGGACATGGACAAGCTCAGACTTTTGCCCAAGTGCAGTCACGTGTTTCACCCCGAGTGCATCGACGCGTGGCTCGCCTCGCACGTGACTTGTCCTGTCTGCAGGGCCAAGATGAAGTCGGAAAACATGGAGTTCAAGGTTGAGATTCAGGAGTTAGAGGGAACTGCCAACCATGTGTTCGATGAAATGTCTGGGAGAATGGGTGAGGTTTCTTGTGATGGGAACGAAGGTGGGGTTGGTGAGGGAGTTGATGGGGTTGTTGGGAAGTGTAATGGGACCTCAAAAGTGAGAGCTTTTGGGTTGTTGGTGAGGTCGCACTCTACGGGTCACTCTCTTGTGGAACCGGGGAAGAGCTTGGAGAGGTTCACTTTGAGGTTGCCTGAGGAATTGAGGAAGCAGATTCTGGAAGCCAATCATAAGTGTAGTGGTGGTAGTGGTGGGATGAAGCGTTCTGCAAGCTACGACGTGGTTTTGCAGAGTGAAGTTGGTGAAGGTAGTAGTAGTAATAAGGGGAGTAAGAATAGCAGGTGGGTGCTGTCTATGACACCTCCGTTTGTTTCTCGCGGTTGGGGTCATTTTAGTACTTCTTCTGGTTTGGCACCGCCGAATGAGTGCTCAACATGCTCTGGGATTCCTAGGCTTTGGGGTTCTTCAGCGGCAAGAGAAGAGAAATCCATCAGAAAGGCTGCAAAGAGCTCCTTTGTTGATTTCAGCACCAAGGACAAGCTGGATGCCATGAGAGAATAA 1125 0.5147 MNFLRYCHVITTIFLLSVPNITAQLAAPSAHRPVVTQNNDGNPSIAIVLVVLIFAFFMTGFCAVYIRHCNESYVVQGAAAANAATAPRGVDPEVLSTFPIMVYSTVKHLKTGHSASLQCAVCLSEFKDMDKLRLLPKCSHVFHPECIDAWLASHVTCPVCRAKMKSENMEFKVEIQELEGTANHVFDEMSGRMGEVSCDGNEGGVGEGVDGVVGKCNGTSKVRAFGLLVRSHSTGHSLVEPGKSLERFTLRLPEELRKQILEANHKCSGGSGGMKRSASYDVVLQSEVGEGSSSNKGSKNSRWVLSMTPPFVSRGWGHFSTSSGLAPPNECSTCSGIPRLWGSSAAREEKSIRKAAKSSFVDFSTKDKLDAMRE 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03339 374 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 167 IPR013083 -
Adu05g03339 374 PANTHER RING FINGER DOMAIN-CONTAINING 14 281 - -
Adu05g03339 374 SUPERFAMILY RING/U-box 112 165 - -
Adu05g03339 374 Pfam Ring finger domain 118 161 IPR001841 -
Adu05g03339 374 CDD RING-H2_EL5_like 118 161 - -
Adu05g03339 374 ProSiteProfiles Zinc finger RING-type profile. 119 161 IPR001841 -
Adu05g03339 374 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL31-LIKE 14 281 - -
Adu05g03339 374 Coils Coil 161 181 - -
Adu05g03339 374 SMART ring_2 119 160 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03339 Adu-Chr5 105829567 105831167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03339 2 314 Rapid Response to Elicitors AT3G05200 36.070 4.03e-54 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03339 K10664 - gmx:102665105 223.402