Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03304 ATGGCACCTTCTCGGGTGGCTGGAGGATTGACCCAATCATCATCAAGTTCTGGAATTTTTTTTCAAGGAGATGCACAATCACATAGTATAGTTAACTCTCCGTTAAACTCGCCATTCATTAACTCATCTAATGCGGTTCCTGGAACTGGTCTTCCAAACCTGGGTCCAGTGTCAGGGGATATGAACAATACAATTTTGAACAGTGCGGCAAACTCAGCACCAAGTATTGGACCTAGCTCTTTACTCACAGATGCAAATTCAGCATTCACTGGTGGGCTCCATTTGCCGAGAAGTGCAAGCATTAACACAGACTCATACTTACGGTTACCTGCTTCACCCATGTCATTTACATCAAATAATGTTAGTATTTCAGGGTCATCAGTTATGGATGGTTCGAATGTAGTACAACAGAGCTCTCACCAAGATCAGAATGCTCAACCATTGCAGCAGAATCAGCAGCAAGGAGCTTCTACTGTTATGTCTACACCTGTGTCTCAAATTGGTCCTTCCCCACTTCAAATGGGTGCACAAATACCTGGATCTTTCATGCAAGATCCAAATAATTTATCTCAGCTGTCCAAAAAACCTAGGCTGGATATCAAGCAGGAGGATATAATGCAACAGCAGGTGATACAGCAGCTTCTTCAGAGACAGGACCCCATGCAATTCCAGGGTCGTAATCCACAGATACAGGCTTTGATGCAACAGCAGCAAAGACTGAGGCAACAGCACATCCTTCAGTCAATGCCACAGTTACAGCGAGCACACTTACAACAACAGCAGCAGCAACAGCAACAAATGCACTTGAGGCAGCAGCAATTACAGCAACAATCAATGCAACCCATATCTGCGGTGAAGCGTCCGTATGACAGTAGCGTTAATGGTGTATGTGCTCGAAGATTAATGCAATACCTCTATCATCAAAGGCAACGACCAATTGAAAACACTATTGCTTATTGGAGAAAATTTGTGGCCGAGTATTACTCTCCTCGAGCAAGGGAACGGTGGTGCTTGTCTTTGTATAATAATGTTGGGCATCATGCACTAGGTGTTTTCCCTCAGGCATCTATGGATGCGTGGCAGTGTGACATATGTGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTTTGAAGTGCTCCCTAGACTTAGTGACATCAAATTTGGCAGTGGAGTTATCGATGAACTTTTATTTTTGGATTTGCCACGCGAACAAAGATTTCCTTCTGGTTTAATGATGTTAGAATATGCAAAAGCGGTTCAAGAGAGTGTATATGAGCAGCTTCGTGTTGTTCGTGAAGGTCACCTCCGTATTATATTTACACAAGACCTGAAGATATTATCTTGGGAGTTCTGTGCAAAGCGCCATGAAGAACTTCTTCCTAGAAGGTTGGTTGCACCACAGGTAAATCAGTTGGTTCAAGTAGCTCAAAAATGCCAGAGTACAGTTGCTGAAAGTGGTCCAGATGGGGTTTCTCAGCAAGATCTTCAAACAAACAGTAATATGGTATTGGCTGCTGGGCGTCAACTTGCAAAGAGTCTCGAGTTGCAATCAGTAAATGACTTGGGTTTTTCCAAAAGATATGTAAGATGTTTGCAGATTTCCGAGGTTGTCAATTCCATGAAAGATCTAATGGATATCTGTCGGGAGCACAAAATTGGGCCAATGGAGAGCTTGAAAAGTTATCCTCGTTTTGCAACCCCGGCCAAGCTTGAGAAGCAAAAAATTCATGAGATGGAACAACTAGCAAATGCTCAAGGTCTGCCAACCGATCGAAACACACTCAACAAACTGATGGCACTGAATCCTGGTCTGAACAACCCAATAAACAATAATCTTAATATGGGGAATCGCGGTGCTTTGAGTGGGTCAGCACAAGCTGCTCTCACAATGTCTAACTACCAGAATCTTCTCATTAGGCAAAACTCAATGAATTCAAGCCCTGGCTCAATTCAGCGAGAAGGATCGTCATCTTTCAACAATGCGAACCAGAGTCCCTCTTCAGCTATGCAAGGTGCTGCTGCCGCTGCTTTTATTCCAGGCTCAATGCAGAATTCAACCGGTTTCCCAAGTCCCCATCTACCCCCACAGCAGCGGCAGCAACACCTACAGCGTTCAGCAAGTGCGAATGGTTTACTGCAACAAAACCATTCACAGGGATCCCAAGGAAATCAAGCTCTACAGCAGCAGATGATCCAGCAACTGCTGATGTCAAATAACAATGGGGGAGTGCAATCACAATCTCTTAGTGGACCCAATGCAAATGGGAGCATAGCAAAGAATGGGTTGAGTTTCGGAGGCCACTCTCCTACTCCTTCCATAACTGGAGGATCTATCAATGTTTCAGGAAACAACGGCCCTGTTTCAAGGAGTAATAGCTTCAAAGTGGCCTCAAACAGTGATTCTTCTGCAGCCGGTGGCAACAATGGTATCAACCAGAGAACGCCAGATATGCCGCAAAATATCCTTTTGCAAGATGTGGTTCCGGATATTGTCGGTGATTTCACCGATAGTCCCTTCTTCAATAGTGATCTAGATGATAACATGGGTTTTGGCTGGAAGGCATAA 2568 0.4428 MAPSRVAGGLTQSSSSSGIFFQGDAQSHSIVNSPLNSPFINSSNAVPGTGLPNLGPVSGDMNNTILNSAANSAPSIGPSSLLTDANSAFTGGLHLPRSASINTDSYLRLPASPMSFTSNNVSISGSSVMDGSNVVQQSSHQDQNAQPLQQNQQQGASTVMSTPVSQIGPSPLQMGAQIPGSFMQDPNNLSQLSKKPRLDIKQEDIMQQQVIQQLLQRQDPMQFQGRNPQIQALMQQQQRLRQQHILQSMPQLQRAHLQQQQQQQQQMHLRQQQLQQQSMQPISAVKRPYDSSVNGVCARRLMQYLYHQRQRPIENTIAYWRKFVAEYYSPRARERWCLSLYNNVGHHALGVFPQASMDAWQCDICGSKSGRGFEATFEVLPRLSDIKFGSGVIDELLFLDLPREQRFPSGLMMLEYAKAVQESVYEQLRVVREGHLRIIFTQDLKILSWEFCAKRHEELLPRRLVAPQVNQLVQVAQKCQSTVAESGPDGVSQQDLQTNSNMVLAAGRQLAKSLELQSVNDLGFSKRYVRCLQISEVVNSMKDLMDICREHKIGPMESLKSYPRFATPAKLEKQKIHEMEQLANAQGLPTDRNTLNKLMALNPGLNNPINNNLNMGNRGALSGSAQAALTMSNYQNLLIRQNSMNSSPGSIQREGSSSFNNANQSPSSAMQGAAAAAFIPGSMQNSTGFPSPHLPPQQRQQHLQRSASANGLLQQNHSQGSQGNQALQQQMIQQLLMSNNNGGVQSQSLSGPNANGSIAKNGLSFGGHSPTPSITGGSINVSGNNGPVSRSNSFKVASNSDSSAAGGNNGINQRTPDMPQNILLQDVVPDIVGDFTDSPFFNSDLDDNMGFGWKA 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03304 855 MobiDBLite consensus disorder prediction 127 178 - -
Adu05g03304 855 MobiDBLite consensus disorder prediction 643 671 - -
Adu05g03304 855 MobiDBLite consensus disorder prediction 742 817 - -
Adu05g03304 855 MobiDBLite consensus disorder prediction 643 707 - -
Adu05g03304 855 MobiDBLite consensus disorder prediction 127 172 - -
Adu05g03304 855 Coils Coil 257 277 - -
Adu05g03304 855 MobiDBLite consensus disorder prediction 680 707 - -
Adu05g03304 855 Pfam LIM-domain binding protein 300 560 IPR029005 -
Adu05g03304 855 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 162 854 - -
Adu05g03304 855 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 150 - -
Adu05g03304 855 PANTHER LIM DOMAIN-BINDING PROTEIN 162 854 IPR029005 -
Adu05g03304 855 PANTHER LIM DOMAIN-BINDING PROTEIN 5 150 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03304 Adu-Chr5 105460529 105466560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03304 281 569 C2H2 Transcription Factor Family AT1G43850 57.439 7.02e-108 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03304 - - gmx:100816886 1182.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03304 05 105460529 105466560 Adu05g03304 05 105460529 105466560 ECH