Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03296 ATGTTCAAAGTGTTGTCTGCAAACATACACAGTGCCATGCCCAAGAGCTTTGTGGCTGGTCCATCACTTCATATGCTGAGACCCATCACATGGAATGATAGGCCGGCTCCAAGGAATGATAATAAGCTGGTACCAGAGCCAAAGTCAGCTCTGATTCCGGCTCCAGCTCTTTTTGATTTGTCAATTTCGGTTGCGGTCCCAGCTCCAGTTCTGGCCCCAACACCGGCTCTAGTCCTAGCTCAAGGTACGGCTCCGGTTTCAGCTCCAGCTCAGGTCTCAACACCAGCTCCAGAACCGGCTCCTGTCCTAGCTCAACGTCCGGCTCCAGCATCGGCTCCGACCCTAGCTCAAGGTCCGGCTCTATCTCCAGTCTCGACACCGACTCCAGCATGGGCTCCAGCTCCAATTTTGACACTGGCTCCGGCTGCCATAGAAAATTCATTGGAAAAAGAAGGACAAGAAGAGTTATCACCATCACGATCTGCACCATCGTCAAAAAAGTCTAAGGCTAATAAGGAAAAAAAAAGAAAGGGTAGTGAAGTAGCCGCATCGGCTCCTAAGAAGCCTAAGAAAAAAATTATTTGGACAAATTACCTTCATAACCTATTCCTCCTAGCCATAAGGCACATTGGAATACATAAGGCGGTGCCAAAGAAAATTCTTGAGGTGATGAATGTGCCTAACTTGACTAGGGAAAATGTTGCCAGTCACTTGCAGAAATACCGAATATTTCTGAGAAAAATTGCAGAGAAAGGGATAATTGCAGGAATATCTGATAGAACACTAAGGTCAAGGTTCGCTGCTGAGCTTCCAATTAAGATGATCAGAGCGTTACAAGCCTTATATGAGAAGCTTAAAAATAATAATAATTTTGGAACCCCCTTACCCATTTCATTGATCCAAGCTCTCCTTGATTACCATCACCCTTACAACCCTAATTTTCCTTACCTCATTCCAACCAATAATAACACAGCCTTGAACCAAGTCATGAGTCTTGGAGTTGCACCCCAATTCCTTGGACCAAAAGCTCCTATTGGTAATGCCAACAACAACACTATGATCCACCATCAGCTTCCAATTTATGCTCCATATGATCCAGTAATGCATCATCAAAACTATGCTCAATCACCAATGGGGATTAACAATAATCATCAGCAGCAGAGCTATGATCCAAGAGTGTATCATCAAAGCTATGATCTTGGAAAGGGAAACATGGTTTCTTTGGGAAACCCTAATGTCAATAATAACATTCCCATGATGAATGCTGCTCCTTCTTGTTACCCTAGTGTTCCCCCTGCAGGGATTCACAATCAAATGAAGTATAATTATGGTGTCCAAGGCCATGGAGGGTTCAATGGTGTTGGTGTTGGTGGTGCAACTACTAATGCTGTTCCTATTCCTATTCCCATTTCCAATAACCACTATAATAGTAATGTTAATGGATTTGAATTCATGGATGGAGCTCCTATCAATAATGTAAATGTGGGAGCTTTTGGGAATAATGGAAATTATCCTGCTTCGGTTCAAGGATGTTATGTTCCTCCTGGATTCTATGCTCCTCCTCCTTCTCCGGAATGTTATGGTTCTCCTTCTCATCCTCCTCGTACCGGATATTATGCTCCTCCGCCGCCTCCTCCTGCAACCGCGGCTAACAATAATCTAACAATTATTGATGAACTTTCGGCAATGTTGCTGCATCATGCAGCAGCACAAAAGAATTCAGGAGGGATCCAAGACCAAGATTTGCCTCCGCTAGTTGAAAGCCCTTGCGACAGCAATGAAGAACACTCTAAAAATGCAAGTGCAATCAATGAGGATCAGAGTATTCTAGATGATGATTACGTTCTTTCCAACCTTCTCTTCATGCTAGAGGACATGCATATTCTTAAAGAGTATGACCAGGCAGCCGAGAAACAAGACGGCAAAGAATTTTTTAAGCCTCACTTATCCACTTCTTCTAATGTGGTGCAATCTCCTGAACAGGTTGGAGGGAACCAAGTTCCTGATGACTTTTTTGACTTTTCTGGCTCGGCTAATCTTATTCAACAGGGCGATAATGAATTTCTGGATATTGAAATCTCTGATGAGATGTTCACCACTACAAACAATGGCTCTCCAATAACAAGTAACTACTCAGTTTCAAAGCAGGATTGGGACAAGACCCTCATTGAACTCATGTTTGGGAATCAAGCAAACTAA 2199 0.4338 MFKVLSANIHSAMPKSFVAGPSLHMLRPITWNDRPAPRNDNKLVPEPKSALIPAPALFDLSISVAVPAPVLAPTPALVLAQGTAPVSAPAQVSTPAPEPAPVLAQRPAPASAPTLAQGPALSPVSTPTPAWAPAPILTLAPAAIENSLEKEGQEELSPSRSAPSSKKSKANKEKKRKGSEVAASAPKKPKKKIIWTNYLHNLFLLAIRHIGIHKAVPKKILEVMNVPNLTRENVASHLQKYRIFLRKIAEKGIIAGISDRTLRSRFAAELPIKMIRALQALYEKLKNNNNFGTPLPISLIQALLDYHHPYNPNFPYLIPTNNNTALNQVMSLGVAPQFLGPKAPIGNANNNTMIHHQLPIYAPYDPVMHHQNYAQSPMGINNNHQQQSYDPRVYHQSYDLGKGNMVSLGNPNVNNNIPMMNAAPSCYPSVPPAGIHNQMKYNYGVQGHGGFNGVGVGGATTNAVPIPIPISNNHYNSNVNGFEFMDGAPINNVNVGAFGNNGNYPASVQGCYVPPGFYAPPPSPECYGSPSHPPRTGYYAPPPPPPATAANNNLTIIDELSAMLLHHAAAQKNSGGIQDQDLPPLVESPCDSNEEHSKNASAINEDQSILDDDYVLSNLLFMLEDMHILKEYDQAAEKQDGKEFFKPHLSTSSNVVQSPEQVGGNQVPDDFFDFSGSANLIQQGDNEFLDIEISDEMFTTTNNGSPITSNYSVSKQDWDKTLIELMFGNQAN 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03296 732 PANTHER TWO-COMPONENT RESPONSE REGULATOR 145 493 IPR045279 GO:0009736
Adu05g03296 732 PANTHER RESPONSE REGULATOR 23-RELATED 145 493 - -
Adu05g03296 732 MobiDBLite consensus disorder prediction 92 106 - -
Adu05g03296 732 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 190 243 IPR006447 GO:0003677
Adu05g03296 732 Gene3D - 187 249 - -
Adu05g03296 732 MobiDBLite consensus disorder prediction 88 127 - -
Adu05g03296 732 MobiDBLite consensus disorder prediction 149 186 - -
Adu05g03296 732 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 187 246 IPR017930 -
Adu05g03296 732 SUPERFAMILY Homeodomain-like 189 247 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03296 Adu-Chr5 105303042 105308448 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03296 147 266 Response Regulator Gene Family AT5G07210 52.419 1.23e-29 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu05g03296 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03296 - - aip:110272169 885.174