Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03293 ATGTCTTTAAAAATTCTTCAGACAACATTTTCTTCTTCTTCTTCTTCGCTTCTTGTTCCAAATTCCATGGCGCTCTCTCTCTCTCACAGTCCTCTTCGTTTTCCATGTTCTCATTCTTCTCTCAAACCGAAGCTCGCTTTATCTCTCCCTCGCTCTTCTTTCTCACCCACTCTCTCCTTCTCTCCTGCTTCCAATGTCAAGTTCACCACTGCCACACCAAGTGCCTACGTCACAGGCCCCGGCTCGGATCCAATCTTCGCTGAACTGGATCCAAAGCTTGACGGGTCGGGGCGGTTTTTTGAAGTCCTTATTGGTGTTAGACCAGAGCCATTGTGGAAGTTGCTCAGTCAAATTGGAGTGCTGTATGCAATGGAGCCACTTTTAACCGTTATTTTTGTTGTAAACATGAACACTGTATGGGAGAAAGTTATGTCAACTCTTAGAGCTCAGATCTTTGGCAGAATATTGATTCAAAAGGTTGAATTTTTCGACAAATACAAGGTTGGAGAACTCACTGGTTTGTTAACATCTGATCTGGGTTCCCTTAAAGATATTGTGAGCGAGAATGTCTCAAGGGATCGCGGTTTCAGGGCATTATCTGAGGTCATTGGGACAATATTCATTCTTTTTTCTTTATCCCCTCAGCTAGCCCCACTTCTTGGTATTCTGATGCTCACGGTTTCTGTCTCAGTCGCTGTCTACAAGAGATCAACATTTCCTGTTTTCAAAGCACATGGGTTGGCCCAAGCATCAATAGCTGATTGTGTATCAGAAACATTCTCTGCTATTCGAACAGTAAGATCTTTTGGTGGTGAAAAGCGGCAGATGTTTACATTTGCTAAACAGGTTCTGTCTTTCCAGTCAAGTGGGATAAAGCTTGGTACTTTCAAATCATTTAATGAATCTATGACCAGGGTTGCTGTTTATATCTCTTTGATTTCATTATATTGTCTTGGAGGGAACAAAGTTAAGGCGGGTGAGCTCTCTGTCGGAGCTATGGCATCTTTTATTGGATATACTTTCACTTTAACATTTGCTGTTCAAGGACTGGTTAATACCTTTGGGGATCTTCGAGGAGCTTTTGCGGCCGTTGACAGGATCAACTCTGTTTTATCTGGAGTTCAAGTTGATGATTCTCTTGCCTATGGCTTAGAAAGAGAACTAAGGCAACAGAAAGCAGTGGATGATGAGAAATATAAATTATTCTTCTCTAATAGTTCAACTGAGAAAAACCAAATGCATTACATGTCGGCACTAAAAACATCTAGCAATTTGTTTAGCTTGGCTTGGTCTGGAGATGTTTGTCTTGAAGATGTCTATTTCTCTTATCCTTTAAGGCCAGATGTGGAAATCTTACGTGGGTTAAATTTAAAACTAAATTGTGGAACTGTAACTGCACTGGTAGGTTCTAGTGGCGCAGGCAAAAGTACCATAGTGCAGCTATTGGCTAGATTCTATGAGCCAGCAAGAGGTTGCATAACGGTTGCGGGAGAGGATGTAAGAACATTTGACAAGAGCGAATGGGCCCGGGTTGTCTCTATTGTAAATCAAGAGCCTGTTCTCTTCTCGGTGTCGGTTGGAGAAAATATTGCATATGGTCTTCCAGATGAGAATGTTTCTAAGGAGGATGTCATTAAGGCAGCAAAAGCTGCCAATGCTCATGATTTTATCATCTCACTTCCACAGttgtcttcatgtaaagttaatagttaa 1713 0.4127 MSLKILQTTFSSSSSSLLVPNSMALSLSHSPLRFPCSHSSLKPKLALSLPRSSFSPTLSFSPASNVKFTTATPSAYVTGPGSDPIFAELDPKLDGSGRFFEVLIGVRPEPLWKLLSQIGVLYAMEPLLTVIFVVNMNTVWEKVMSTLRAQIFGRILIQKVEFFDKYKVGELTGLLTSDLGSLKDIVSENVSRDRGFRALSEVIGTIFILFSLSPQLAPLLGILMLTVSVSVAVYKRSTFPVFKAHGLAQASIADCVSETFSAIRTVRSFGGEKRQMFTFAKQVLSFQSSGIKLGTFKSFNESMTRVAVYISLISLYCLGGNKVKAGELSVGAMASFIGYTFTLTFAVQGLVNTFGDLRGAFAAVDRINSVLSGVQVDDSLAYGLERELRQQKAVDDEKYKLFFSNSSTEKNQMHYMSALKTSSNLFSLAWSGDVCLEDVYFSYPLRPDVEILRGLNLKLNCGTVTALVGSSGAGKSTIVQLLARFYEPARGCITVAGEDVRTFDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDENVSKEDVIKAAKAANAHDFIISLPQLSSCKVNS 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03293 570 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 102 359 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu05g03293 570 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 84 562 IPR039421 -
Adu05g03293 570 CDD ABC_6TM_TAP_ABCB8_10_like 96 367 - -
Adu05g03293 570 Pfam ABC transporter transmembrane region 113 346 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu05g03293 570 PANTHER ABC TRANSPORTER B FAMILY MEMBER 28 84 562 - -
Adu05g03293 570 Pfam ABC transporter 452 552 IPR003439 GO:0005524
Adu05g03293 570 SUPERFAMILY ABC transporter transmembrane region 109 372 IPR036640 GO:0005524|GO:0016021
Adu05g03293 570 Gene3D ABC transporter type 1, transmembrane domain 77 373 IPR036640 GO:0005524|GO:0016021
Adu05g03293 570 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 426 564 IPR027417 -
Adu05g03293 570 Gene3D - 430 562 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03293 Adu-Chr5 105254055 105259502 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03293 432 562 Calmodulin-binding Proteins AT2G36910 44.275 2.62e-30 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03293 K05657 - gmx:100791034 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03293 05 105254055 105259502 Adu05g03293 05 105254055 105259502 ECH