Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03277 ATGGGAAGAGGGAGAGTGGTTCTGGAGAGAATAGAGAACAAGATAAACAGGCAAGTTACATTTTCAAAGAGAAGGAGTGGTTTGTTGAAGAAAGCTTTTGAATTATCAGTGCTTTGTGATGCTGAAGTAGCACTCATCATCTTCTCTAGTCGCGGCAAGCTTTTTCAGTACAGCAGTTCTGACATCAGTGGAATTATTGAGAGGTATCGCCAATGTCGTTACAACAAGTTGTCACAGACTGGCAATTTATTTGATCAGCAATCACAGAGCTTGTACCAGGAATTCTTGAAATTAAAGGTAAAATATGAATCTCTGGAGCGAACACAAAGGCATTTTCAAGGAGAAGAACTTGAGCCCCTTGGCATGAAGGAACTGATGAACCTTGAGAAACAAGTAGAAAGAACTCTTGCACAGGCTCGACAGCTCCATATGAGGAAGCTCATAACACGACAGGCAGAATTAAGTGAAAAGGTGCACGAGGACCAGGAGCTCAACAAAAAGTTGAAATCCAAGTTAAGAGATGAATTCCCAGACCTCATTGCTGAGCACAACAACCCTATTATTCATGAGTTGAATGAAGTACAAGCCATTAATCAGTTCCAGTCTGAGACGGTCTTAAACAACACACGCATGTTTGAGCATCATAATCAGGAGGGAAAAGCAAGCGGTACAAGGCAACAAGATGGTCAGAGCAGCCATGACAAAAACAATAATGGTGATGATGATGCAAAGTTGCAAGCCAAAAGCCATAAACTCTCTTCTATAGAAGACGTCACAATTTTAGGTAATTCCAATCATATCTCAAAAGAAGACGCAAAGGAAACAAGTTCGCTGGTTGTTTCCTTTGGGGAACTGCTGATAGACTTTGTGCCAACAGTGGGAGGAGTGTCGCTGGCCGAAGCACCGGCTTTTCAGAAAGCTCCTGGTGGAGCTCCTGCCAATGTAGCTGTTGGTATATCTAGACTTGGAGGTTCATCAGCTTTCGTCGGAAAGGTTGGAGCAGACGAGTTCGGTTACATGTTGGCCAACATATTGAAGGAAAACAATGTTGACATGTCTGGCATGCGGTTTGACCCGAATGCTAGAACTGCATTAGCTTTTGTTACACTTAGAGCTGACGGTGAACGAGAATTCTTGTTTTTCCGGAATCCAAGTGCTGATATGCTTCTTCATGAATCAGAACTTGATATAAATCTCTTAAAGAAGGCTAGAGTCTTCCATTATGGCTCCATCAGCTTGATTGACGAGCCGTGCAAGTCAGCTCATCTTGCTGCTATGAGAATTGCCAGCAATTCTGGTAGTATTCTCTCTTATGATCCAAATTTGAGATTAGCACTATGGCCATCAGCCGAGGCTGCTCGCAAGGGCATAATGAGTATTTGGGATCAAGCCGATGTCATAAAGATAAGTGAGGAAGAGATTACATTTTTGACGGGTGGTGATGATCCTTATGATGATAATGTTGTATTGAAGAAACTTTTTCATCCAAATCTCAAACTTCTAATTGTTACTGAAGGCTCATCTGGTTGTAGATATTACACCAAGGAATTCAGGGGCAAAGTTGGAGGTGTTAAAGTCAAACCTGTTGACACAACTGGTGCCGGTGATGCATTTGTCGGTGGATTTCTCTACAACTTGGCTTCTGACCCAAGTATTCTTCAGGATGAGAAACGGCTGCGAAAAGCTCTATATTTCGCAAATGTATGCGGCGCCATCACTGTAACTGAGAGAGGTGCCATTCCTGCAATGCCTACAAAGGAAGCTATCTTGCAATTCTTACTAGAATCTGCTTCAATATAG 1800 0.425 MGRGRVVLERIENKINRQVTFSKRRSGLLKKAFELSVLCDAEVALIIFSSRGKLFQYSSSDISGIIERYRQCRYNKLSQTGNLFDQQSQSLYQEFLKLKVKYESLERTQRHFQGEELEPLGMKELMNLEKQVERTLAQARQLHMRKLITRQAELSEKVHEDQELNKKLKSKLRDEFPDLIAEHNNPIIHELNEVQAINQFQSETVLNNTRMFEHHNQEGKASGTRQQDGQSSHDKNNNGDDDAKLQAKSHKLSSIEDVTILGNSNHISKEDAKETSSLVVSFGELLIDFVPTVGGVSLAEAPAFQKAPGGAPANVAVGISRLGGSSAFVGKVGADEFGYMLANILKENNVDMSGMRFDPNARTALAFVTLRADGEREFLFFRNPSADMLLHESELDINLLKKARVFHYGSISLIDEPCKSAHLAAMRIASNSGSILSYDPNLRLALWPSAEAARKGIMSIWDQADVIKISEEEITFLTGGDDPYDDNVVLKKLFHPNLKLLIVTEGSSGCRYYTKEFRGKVGGVKVKPVDTTGAGDAFVGGFLYNLASDPSILQDEKRLRKALYFANVCGAITVTERGAIPAMPTKEAILQFLLESASI 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03277 599 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 530 543 IPR002173 GO:0016773
Adu05g03277 599 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Adu05g03277 599 ProSiteProfiles K-box domain profile. 88 178 IPR002487 GO:0003700|GO:0005634|GO:0006355
Adu05g03277 599 MobiDBLite consensus disorder prediction 234 250 - -
Adu05g03277 599 CDD MADS_MEF2_like 2 78 IPR033896 GO:0000977|GO:0045944
Adu05g03277 599 Pfam K-box region 86 172 IPR002487 GO:0003700|GO:0005634|GO:0006355
Adu05g03277 599 Gene3D - 13 110 IPR036879 GO:0003677|GO:0046983
Adu05g03277 599 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Adu05g03277 599 PANTHER HEXOKINASE FAMILY MEMBER 269 595 - -
Adu05g03277 599 SUPERFAMILY Ribokinase-like 279 593 IPR029056 -
Adu05g03277 599 SUPERFAMILY SRF-like 2 79 IPR036879 GO:0003677|GO:0046983
Adu05g03277 599 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 309 333 IPR002173 GO:0016773
Adu05g03277 599 Gene3D - 275 598 IPR029056 -
Adu05g03277 599 PRINTS Ribokinase signature 304 323 IPR002139 GO:0016301
Adu05g03277 599 PRINTS Ribokinase signature 501 512 IPR002139 GO:0016301
Adu05g03277 599 PRINTS Ribokinase signature 459 474 IPR002139 GO:0016301
Adu05g03277 599 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Adu05g03277 599 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Adu05g03277 599 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Adu05g03277 599 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Adu05g03277 599 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Adu05g03277 599 MobiDBLite consensus disorder prediction 215 250 - -
Adu05g03277 599 PANTHER FRUCTOKINASE-7-RELATED 269 595 - -
Adu05g03277 599 Coils Coil 122 145 - -
Adu05g03277 599 CDD bac_FRK 278 580 - -
Adu05g03277 599 Pfam pfkB family carbohydrate kinase 278 585 IPR011611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03277 Adu-Chr5 105073525 105083406 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03277 1 181 MADS-box Gene Family AT2G45650 54.011 3.76e-52 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Adu05g03277 PfkB 3.3e-78 CL0118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03277 K00847 - gmx:100778752 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03277 05 105073525 105083406 Adu05g03277 05 105073525 105083406 ECH
Adu05g03277 05 105073525 105083406 Adu09g02415 09 111524193 111526672 ECH
Adu05g03277 05 105073525 105083406 Adu09g02415 09 111524193 111526672 PCT