Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03268 ATGTTTCCTTTACAACGAGGCAATGAGCTGGTGATTCAGTTTTCTAATACCTCCCACCAACACAAAATCTCCCAAGATCTGATCCTTGAAGATTATGCTTCTCTTGATGTCAATGATTCTGATAAAATATTGTTCACAAAAAGCCAATCATCAAATAAACTATTTTATGATGGTGCTGCTGCTGCTGATGAGGATAACAACAACAACAACAACAACAACAACGATTCTAACAACGATGATGATAATAAGAAGAAGAAGATGGTTCATAGAGAGATTGAGAGGCAAAGGAGGAAAGAAATGGCTACCCTTTATTCCTCTCTTAGATCCCTTCTTCCTCTTCAGTTCATCAAGGGAAAGCGTTCAATATCTGACCACATGAACGAGGCAGTGAATTACATAAAGTACATGCAAAATAACATCAAGGAACTTGGTGCTAAAAGAGATGAACTGAAGAAGAAGAAGAAGCTCTCAAATTATTACCACCACCATGATAACAATGATAAACCTACATCTAGCACTAACAGATACTTCACTCTCCATGAGAGTGATAATGGTGTTCTCGGAATTGAAATCACCGGTGGCGCCGCCGCCGCCGCCGGAGAAGAAGAAGGTGTCACACTATCAGAGATTCTGGGGCTACTGGTTGAAGAAGAAGGACTTGAAGTTCTTAGTTACCTTTCTAGCAAAGTCAATGGAAGATTGGTACACAGTGTTCAGTGTGAGGTAGTCAATTCCAACAGTGTAGATCTATTTGAGCTGAGAAGGAAACTTGCAAGTTTAATTCAATGA 789 0.3967 MFPLQRGNELVIQFSNTSHQHKISQDLILEDYASLDVNDSDKILFTKSQSSNKLFYDGAAAADEDNNNNNNNNNDSNNDDDNKKKKMVHREIERQRRKEMATLYSSLRSLLPLQFIKGKRSISDHMNEAVNYIKYMQNNIKELGAKRDELKKKKKLSNYYHHHDNNDKPTSSTNRYFTLHESDNGVLGIEITGGAAAAAGEEEGVTLSEILGLLVEEEGLEVLSYLSSKVNGRLVHSVQCEVVNSNSVDLFELRRKLASLIQ 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03268 262 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 84 136 IPR011598 GO:0046983
Adu05g03268 262 CDD bHLH_AtORG2_like 87 149 - -
Adu05g03268 262 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 261 - -
Adu05g03268 262 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 261 IPR015660 GO:0003700|GO:0006357
Adu05g03268 262 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 81 159 IPR036638 GO:0046983
Adu05g03268 262 MobiDBLite consensus disorder prediction 77 91 - -
Adu05g03268 262 MobiDBLite consensus disorder prediction 61 91 - -
Adu05g03268 262 Pfam Helix-loop-helix DNA-binding domain 85 137 IPR011598 GO:0046983
Adu05g03268 262 Gene3D - 75 163 IPR036638 GO:0046983
Adu05g03268 262 SMART finulus 90 142 IPR011598 GO:0046983
Adu05g03268 262 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03268 Adu-Chr5 104896864 104898997 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03268 80 260 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 41.848 2.34e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu05g03268 HLH 2.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03268 - - aip:107644748 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03268 05 104896864 104898997 Adu05g03268 05 104896864 104898997 ECH