Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03251 ATGAGTGACAAAGAGAAGTTTGAGCTTGACAGAAAGGAGGATCCCATGAATTATTCCACCGGAATGGCCTCGGATCGGAGATTCGGAAGTTCCAATCTTCCGAATTCATCTGTGGGTTTGGCTGGCAGAGGGGATCTAAATGGTTCCTCTTCATGTTCCTCTGCTTCCCTAGTGGACTCCTTTGGCCCAAACTTCTGGGACACTACGACGAATTCCCAGAACTTGGGGTTTTGTGGCATCAATGTTCACAACAGTGGGAGCTCTTTGAACCCAATTGAACTCAGAAAAGATGGGTTTGGATTTGGAAGAGGTGGTCATGATCATGGAACACTTGAAATGGGTTGGAATCAAGGTAATGGCTTTATACCAAATGAGTCTGCAATGTTCTCCCAGAACTTGTCTCGGTTTCCAAGTGATTCTGGATTTATTGAGCGTGCAACGAGATTCTCGTGCTTTGGTGGAGGGGATTTCGGAGATATGGTGAATGCTTATGGGATTCCTCAATCCATGGGCCCTTATGCTGGTACCGGTGGTGAGGCAATTCACCGAGCAAGAGATGGAGGACAACCTCAAGAGAGCAATCCAAATGAAGCTGAAGCTGAAGCTGTGAAAGATGCGACACCATCTGTGGAGTATCTTGCTACTAAAGCTAGCCCGCTCAAGAATGATAAAAGAAGTGAAAACCATGTAATGCCTCAAAATGAAGGACAACAAGGTCCTTCTAGGCCTCCGAATGAGACTGACCGAGCCAAATCTAGCGATGATGGCGGTGTTCAAGATGACTCCCCAATGTTGGATGGTGTTAGCGACGAACCTTGTCTTAAAGGACTAGATTCAAAGAAAAGGAAAAGAATTGGGCAGGATGCTGATAATGATAAAGCTGTTGAACTACCTACGGAAGGTGCAGGGGATATCTCTGAGAGCCAACAAAAGGGAGAGCAGGAACCTACTCCAACAAACAAAGCCTCTGGAAAGAATGCCAAACAAGGGCCTCAAGTTTCGGATCCACCTAAGGAGGAATACATACATGTCAGGGCTCGGCGGGGTCAAGCAACTAATAGCCACAGCCTTGCAGAGAGAGTGAGGAGGGAAAAGATAAGTGAAAGGATGAAGTTTCTTCAAGACCTTGTACCTGGATGCAGCAAGGTGGTTACTGGCAAGGCCGTAATGCTTGATGAAATAATTAACTATGTACAGTCGCTTCAACGACAGGTTGAGTTCTTGTCCATGAAACTCGCAACTGTAAATCCGCGGCTGGATTTTGATATTGAAGGACTTATCCCTAAAGATATTCTTCACCAACGGCCGGGTCCTTCTTCTGCATTGGGGTTTCCTTTAGAAATGTCTATGGCTTTCCCTCCGCTACACCCATCACAACCGGGACTAATTCAGCCAACTCTTCCTAGCATAGCCAACTCTTCTGATATCCTTCGGAGAACTGTTCATCCACAGTTGGCATCACCCGCTAGTGGAAGTTTCAAGGAGCCAAATCAGGTTCCTGATGTGTGGGAAGATGAGCTTCACAATGTTGTACAGATGAGCTTTGCTACTACAACTGCTCCCATGAGTACCCAAGATGTGGATGGTACTGTGGCAGCAACTCAGATGAAGGCCAAAAATCAGAGTTTCCAGAATATTCTAGAAGTGTTGCTACTGATAAGGCCTTGGTGCAGTTACATTAGCGACAGCAGGGGACATACTATAGGGGTAGTTACTTATCTCCTTCTCTTCGCATGTGAGGTCAGTGCTTCAGAGCCTTCCTCTCCCTCATTCTCTTCCTATCTCGCCGGTCAGTCGTCGCTAGGAACACCAGCCGCCGCCCAGAGCACCAGCCGATACCGCCCTGCCCACCGCAAACGTCTGAGCACCCCCTTCGCACACGTTACGTCATTCACGCAGCCCCCTACACGCCGGTCGTGCAGCCCTCCAGCCGGTGGATTTCACCGTCCCATAATCTTCATCCGCGACATACAGGAGACAGATGGTTGTTTTAGTGTGTAA 2001 0.4793 MSDKEKFELDRKEDPMNYSTGMASDRRFGSSNLPNSSVGLAGRGDLNGSSSCSSASLVDSFGPNFWDTTTNSQNLGFCGINVHNSGSSLNPIELRKDGFGFGRGGHDHGTLEMGWNQGNGFIPNESAMFSQNLSRFPSDSGFIERATRFSCFGGGDFGDMVNAYGIPQSMGPYAGTGGEAIHRARDGGQPQESNPNEAEAEAVKDATPSVEYLATKASPLKNDKRSENHVMPQNEGQQGPSRPPNETDRAKSSDDGGVQDDSPMLDGVSDEPCLKGLDSKKRKRIGQDADNDKAVELPTEGAGDISESQQKGEQEPTPTNKASGKNAKQGPQVSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFDIEGLIPKDILHQRPGPSSALGFPLEMSMAFPPLHPSQPGLIQPTLPSIANSSDILRRTVHPQLASPASGSFKEPNQVPDVWEDELHNVVQMSFATTTAPMSTQDVDGTVAATQMKAKNQSFQNILEVLLLIRPWCSYISDSRGHTIGVVTYLLLFACEVSASEPSSPSFSSYLAGQSSLGTPAAAQSTSRYRPAHRKRLSTPFAHVTSFTQPPTRRSCSPPAGGFHRPIIFIRDIQETDGCFSV 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03251 666 MobiDBLite consensus disorder prediction 303 330 - -
Adu05g03251 666 MobiDBLite consensus disorder prediction 231 246 - -
Adu05g03251 666 MobiDBLite consensus disorder prediction 1 15 - -
Adu05g03251 666 Pfam Helix-loop-helix DNA-binding domain 353 402 IPR011598 GO:0046983
Adu05g03251 666 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 348 419 IPR036638 GO:0046983
Adu05g03251 666 PANTHER BHLH TRANSCRIPTION FACTOR 37 537 - -
Adu05g03251 666 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 37 537 IPR024097 GO:0006355
Adu05g03251 666 MobiDBLite consensus disorder prediction 175 337 - -
Adu05g03251 666 Gene3D - 350 413 IPR036638 GO:0046983
Adu05g03251 666 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 350 401 IPR011598 GO:0046983
Adu05g03251 666 CDD bHLH_AtBPE_like 340 426 - -
Adu05g03251 666 SMART finulus 356 407 IPR011598 GO:0046983
Adu05g03251 666 MobiDBLite consensus disorder prediction 1 34 - -
Adu05g03251 666 MobiDBLite consensus disorder prediction 273 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03251 Adu-Chr5 104607286 104612570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03251 48 516 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 43.983 1.14e-100 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu05g03251 HLH 2.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03251 - - aip:107643749 1038.48