Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03215 ATGACGTTGTTTCATAACGTTCCACAAAAAACAAAAAAGAAAAGCATCCTTCACTCTTCAGCTTCGAGTGATCGTGTGACCCCCAACCCCTTTTTTGAATCAAAAAGCGACCCTAGCCTCCAAACTCCAAAGGCTCGAACAGCAACCCTAGCCTGCACCACTGTCCTTGTCTTCATCGAGCAGCTTCGTCACAGTAGCCATAGTCTTCGTCTGCCCTCTAGTCATCGTCGTCCTCGTCTGCCCTCTGGTCAATGTCGTCTTCATCTGCTCGTTGAAGTATCTGCTCCTTCCTCGTTTATCAAGGCACCAATCTTGGTGTCATTGTTTTGCTCCGCCGTGCGACAACAGATCCACAGCTCCCCTCCCCCGCCACGGTCTGCGCCACCACCAAAAACTTCGCCTCCACCTCAACCATCCGTGCCGCCTCCGGCGAATTCCTCACCCCCAAGTCCCGCATCTGTGCCGCCGCCAAGATCATCGCCACCACCGGCATCAACCCCTCCTCCCCAAAATTCATCTCCTCCTTCGACTTCCACGTCTCCCCCAAGATCTGCACCTCCTCCTCCTCCTCCCACAACACCTAGCACTCAACCGGCTCCTTCAAATTTTCCACCTAGGTCATCATCATCCCCACCACCGCCAAATCAGTTGGCGCCGCCTCCGGCATCCATTCTTACTCCACCTGGAAACGGATCACAGACAGAGAATTCAGGTCCTACAGCTGGAGGTGGTAATGGAATTGGTACCGCTGCAATAGTGGCTATCAGTGTAGTGGCGGGAATTCTGCTGTTTGGGATCATTGGAGTTGCAATTTGGTGCACGATAAAGAGGAAAAAGAAAAAGGTGCTGAGCAATGGTGGTTACGTCATGCCAACAACTCCTGCCTCATCTCCTGATTCAGATTCCTCATTCTATAAGACGCATTCTTCAGCTCCTCTTGTACAAAGCGGCTCTGGCAGTGATGTTTTGTATACACCATCTGATCCTGGTGGACTAGGCCACTCAAGGTCGTGGTTTTTGTATGAAGAATTAATCAAGGCCACAAATGGTTTCTCAACTGAAAATCTCTTAGGCGAAGGTGGATTTGGTTCCGTGTATAAAGGATACCTGCCGGATGGGAGAGAGATAGCGGTCAAACAGCTGAAAATTGGTGGTGGTCAGGGAGAGAAAGAATTCAAAGCTGAAGTCGAGATTATTAGTCGCATACATCATCGTCATCTGGTTTCACTGGTTGGATATTGTATTCAAGATACCAGAAGACTGCTTGTCTATGACTATGTCCCCAATAATACCCTTTATTTTCATCTACATGGGGATGGTAGGCTGGTGTTAGAGTGGGCAAACCGTGTTAAAATTGCAGCTGGTGCAGCTCGAGGGATAGCTTATCTCCATGAAGACTGTAATCCTCGGGTTATTCACAGGGATATCAAGTCATCGAACATTCTTTTAGATTACAACTTCGAGGCTAAAGTTTCAGATTTTGGGCTAGCAAAATTAGCCCTAGATGCAAATACACATATAACCACACGAGTCATGGGAACTTTTGGGTACGTAGCCCCTGAATATGCATCCAGTGGCAAATTGACTGAGAAGTCTGATGTATATTCCTTTGGGGTTGTGCTCTTGGAGCTCATTACTGGGCGGAAGCCAGTAGATACATCTCAACCCTTGGGAGATGAGAGTTTAGTTGAATGGGCTCGACCATTATTGAGTCATGTACTTGATAGTGGGGAGTTGGGGATTTTGACGGATCCAAGGCTAGAAAAGAATTATGTTGAAAGTGAAATTTTCTGTATGATAGAAGTTGCTGCATCTTGCGTTCGACACTCAGCTGCAAAGAGGCCTCGCATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAGGAGCTTCTGACCTAACGAATGGATTGCGAGTTGGAGAAAGCGAGGCTTTTAACTCTGCGCAGCTNNNNAGATTGTTTAGGAGAATGGCATTTGGTGATCAAAATTATAGCACCGATTTCTTTAGCAAGGGTAGTTCAAATACGTGA 2028 0.4739 MTLFHNVPQKTKKKSILHSSASSDRVTPNPFFESKSDPSLQTPKARTATLACTTVLVFIEQLRHSSHSLRLPSSHRRPRLPSGQCRLHLLVEVSAPSSFIKAPILVSLFCSAVRQQIHSSPPPPRSAPPPKTSPPPQPSVPPPANSSPPSPASVPPPRSSPPPASTPPPQNSSPPSTSTSPPRSAPPPPPPTTPSTQPAPSNFPPRSSSSPPPPNQLAPPPASILTPPGNGSQTENSGPTAGGGNGIGTAAIVAISVVAGILLFGIIGVAIWCTIKRKKKKVLSNGGYVMPTTPASSPDSDSSFYKTHSSAPLVQSGSGSDVLYTPSDPGGLGHSRSWFLYEELIKATNGFSTENLLGEGGFGSVYKGYLPDGREIAVKQLKIGGGQGEKEFKAEVEIISRIHHRHLVSLVGYCIQDTRRLLVYDYVPNNTLYFHLHGDGRLVLEWANRVKIAAGAARGIAYLHEDCNPRVIHRDIKSSNILLDYNFEAKVSDFGLAKLALDANTHITTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDTSQPLGDESLVEWARPLLSHVLDSGELGILTDPRLEKNYVESEIFCMIEVAASCVRHSAAKRPRMGQVVRAFDSLGASDLTNGLRVGESEAFNSAQXXRLFRRMAFGDQNYSTDFFSKGSSNT 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03215 675 MobiDBLite consensus disorder prediction 121 226 - -
Adu05g03215 675 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Adu05g03215 675 SMART serkin_6 351 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g03215 675 MobiDBLite consensus disorder prediction 14 40 - -
Adu05g03215 675 ProSiteProfiles Protein kinase domain profile. 351 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g03215 675 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 88 671 - -
Adu05g03215 675 Gene3D Phosphorylase Kinase; domain 1 332 426 - -
Adu05g03215 675 CDD STKc_IRAK 357 627 - -
Adu05g03215 675 PANTHER BNACNNG34790D PROTEIN 88 671 - -
Adu05g03215 675 SUPERFAMILY Protein kinase-like (PK-like) 333 622 IPR011009 -
Adu05g03215 675 Gene3D Transferase(Phosphotransferase) domain 1 427 637 - -
Adu05g03215 675 MobiDBLite consensus disorder prediction 227 243 - -
Adu05g03215 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Adu05g03215 675 MobiDBLite consensus disorder prediction 116 247 - -
Adu05g03215 675 Pfam Protein kinase domain 352 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03215 Adu-Chr5 103894245 103904267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03215 210 675 Trihelix Transcription Factor Family AT5G38560 60.412 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Adu05g03215 Pkinase 1.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03215 - - gmx:100812440 739.569