Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03180 ATGAAGCTGCTAAACAATAATTCAATGACTATTGCTAAGAATGAGGGTTCCCATTTCAAATCTCCTTCTAAGGGTGGTTTTTCTTCGGATAACGGAAACTGTGTTCATGTTGGTATTCTTGCATGGGGTGTTGACCATTTAGCATTTGAGGACTTGTTTTGTGAACAAAGAAACTTTTTGGAGGCCAAGGTAATCTGTGACAGAGAAAGTGAAAGATCAAGAGGCTTCGGATTTGTGACTTATAGCAGCCCTAAAGAGGTCAATAGTGCTATTGAGTCCTTAGATGGCGCGGTAAACTTGCGAATCTACTCCTAG 315 0.4063 MKLLNNNSMTIAKNEGSHFKSPSKGGFSSDNGNCVHVGILAWGVDHLAFEDLFCEQRNFLEAKVICDRESERSRGFGFVTYSSPKEVNSAIESLDGAVNLRIYS 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03180 104 PANTHER - 24 97 - -
Adu05g03180 104 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 37 97 IPR000504 GO:0003723
Adu05g03180 104 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 33 104 IPR000504 GO:0003723
Adu05g03180 104 SUPERFAMILY RNA-binding domain, RBD 22 97 IPR035979 GO:0003676
Adu05g03180 104 SMART rrm1_1 34 103 IPR000504 GO:0003723
Adu05g03180 104 Gene3D - 5 101 IPR012677 -
Adu05g03180 104 PANTHER TRANSFORMER-2-RELATED 24 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03180 Adu-Chr5 103233135 103233556 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03180 44 96 Eukaryotic Initiation Factors Gene Family AT4G34110 39.623 2.92e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03180 - - sind:105161381 108.612