Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03150 ATGGACGATTCTTTTTCAATTTGGGACCTTACTTACCTTCTCGATTTCAAACTTGACAACGACCAAATCCCTTTACCCCTTGACCCTCACCAACCATCTCAACCGTTGGATTTCGATCCTCCAATCCTCCCGATCCTCACAATATTCATTTTCCTCTTTGCGGCCGGGTTCTATGCGTGTGCCCCAAGATCAATGCTTAGCTCGAGAACGAGGTTTTCCCCGGCAAAAAGCGCATGCACCGCTTTCGCCGTGCGTGGCTCACCCTTGGCGGTTCGTTGCCAGGTTCTTGGCTGTGAGGCCGATATCACGGAGCTGAAGGGGTATCACCGAAGGCATAGGGTTTACTTATTGTTTGTGGGTAGTATATTTCTTTCATAA 378 0.4894 MDDSFSIWDLTYLLDFKLDNDQIPLPLDPHQPSQPLDFDPPILPILTIFIFLFAAGFYACAPRSMLSSRTRFSPAKSACTAFAVRGSPLAVRCQVLGCEADITELKGYHRRHRVYLLFVGSIFLS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03150 125 ProSiteProfiles Zinc finger SBP-type profile. 90 125 IPR004333 GO:0003677
Adu05g03150 125 Gene3D - 89 119 IPR036893 GO:0003677|GO:0005634
Adu05g03150 125 SUPERFAMILY SBT domain 91 116 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03150 Adu-Chr5 102754280 102754657 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03150 84 116 SBP-box Gene Family AT5G18830 69.697 3.00e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03150 - - lja:Lj6g3v1916050.1 75.0997