Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03108 ATGGGGACCTCAGCGAACGCCGCCGCTGGTGGCCGTGGAAATCCTGTCGACAAGGGCGTTGACTATGCGCAGTACTTCTGCACCTACGCTTTCCTCTACCACCAGAAGGAGATGCTCTCCGATCGGGTTCGCATGGACGCTTACTTCAATGCCATCTTCGAGAACAAGCATCACTTTAATGGGAAGACTGTTTTGGATGTGGGAACTGGAAGTGGCATTCTTGCTATATGGTCAGCACAAGCAGGTGCAAGGAAGGTATATGCAGTGGAAGCTACAAAGATGTCTGAACATGCGCGTTCTCTTGTTAGAGCAAATAATCTCCAGAATATAGTTGAAGTCATTGAGGGCTCAATGGAGGAAATTACACTGCCAGAGAAAGTTGATGTTATCATCTCTGAATGGATGGGTTACTTCCTCCTGCGCGAATCCATGTTTGATTCAGTTATATGTGCTCGTGACCGCTGGCTCAAACCAACAGGAGTTATGTATCCTAGCCATGCTCGCATGTGGATGGCACCTATCAGGACTGGGATAGGAGATCATAAAATGGGTGACTACCAGTCAGCTATGGATGATTGGCACAATTTTGTTGATGAAACAAAGACCTACTATGGTGTTGACATGAGTACTCTAACAAAGCCCTTTTCTGAGGAGCAGAGGAAATACTATCTACAGACATCACTATGGAGCAATCTTCATCCACATCAAGTGATAGGAACTGCTGCTATAATAAAAGAAATTGATTGTTTAACTGCCACGGTGAATGATATAGAAAAAGTCAGGTCAAAATTCTCGTTGTCAATAACTATGGATAACATGTTGTGTGGGTTTGGAGGGTGGTTTGATGTACATTTTCGGGGAAGAGGTGAGGATCCAGCAGAGCAGGAGATCGAGTTAACTACAGCTCCTAGTGTAGATTGTGGTACACATTGGGGCCAACAGGTGTTCCTGTTGCATCCACCCACACATGTGAATGAAGGTGATAATTTAACCATTTCTTTCCTAATGAGTCGCTCAAAGGAAAACCATCGTCTTATGGAGGTTGAACTTGGGTGTGAAATTCAACAACATTCTGGGAAGCTTCTTGCTCCTTCCAAACATAAGTACTATATTGAATAA 1119 0.4433 MGTSANAAAGGRGNPVDKGVDYAQYFCTYAFLYHQKEMLSDRVRMDAYFNAIFENKHHFNGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMSEHARSLVRANNLQNIVEVIEGSMEEITLPEKVDVIISEWMGYFLLRESMFDSVICARDRWLKPTGVMYPSHARMWMAPIRTGIGDHKMGDYQSAMDDWHNFVDETKTYYGVDMSTLTKPFSEEQRKYYLQTSLWSNLHPHQVIGTAAIIKEIDCLTATVNDIEKVRSKFSLSITMDNMLCGFGGWFDVHFRGRGEDPAEQEIELTTAPSVDCGTHWGQQVFLLHPPTHVNEGDNLTISFLMSRSKENHRLMEVELGCEIQQHSGKLLAPSKHKYYIE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03108 372 Gene3D Vaccinia Virus protein VP39 20 164 IPR029063 -
Adu05g03108 372 Gene3D - 166 372 - -
Adu05g03108 372 Pfam Ribosomal protein L11 methyltransferase (PrmA) 60 133 - -
Adu05g03108 372 CDD AdoMet_MTases 63 163 - -
Adu05g03108 372 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE PRMT10 12 360 - -
Adu05g03108 372 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 12 360 IPR025799 GO:0016274|GO:0018216
Adu05g03108 372 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 19 349 IPR025799 GO:0016274|GO:0018216
Adu05g03108 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 356 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03108 Adu-Chr5 102047149 102051072 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03108 24 324 C2H2 Transcription Factor Family AT3G12270 31.579 9.25e-41 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03108 K11434 - gmx:100790625 680.633