Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03091 ATGGATTGGAGGAAGTTGAGCTCATACGCAAAATCGAAGTGGATATCCACGGTGGCGAGCACATGGATTCAGTGCAGCAGCGGATCACTCTACACTTTCTCAATCTATTCCCAAACCCTAAAGTCAACGCTGCACTACGATCAGTCAACTCTCACCACTGTGTCCGTCTGGAAGGACGTAGGGATCAACGCCGGTGTCCTTTGCGGCCTTCTCTACGACTTCGCTGCGCGCCGAACAGCTAACGGGCCCTGGCTGATCCACTTATTGGGCTCGGCCCAATGCTTCTTGGGCTATTTCCTCATGTGGGCAGCGGTTGCGGGCGTTATCGCGCCGGTGCCCGTGCCTGTCATGTGCCTATTCATGTACGTGACAGCCCAGGCTCAGGGCTACTTCAACACTTCCAATGTTGTCACCGGCGTCCACAACTTCCCTGACTATAGGGGAACCATTGTGGGCATCATGAAGGGATTTCTTGGTCTCAGTGGAGCAATACTAGTTCAAGTGTATAGGACAATATTCAACAACAAGCCTAAAGCATATCTTCTGATGCTAGCTCTCTTGCCGCCGATAAATACTTTGCTGCTTATGTGGTTTGTAAGAATCCACAACACCCGAGAGGGCGACGAAAGGAAATATCTAAACATGTTTTCTTCCATGGCTGTGGTTGTCGCTGCATATCTAATGACTGTTATAATCCTGGAGAACATCCTTAGAGTGCCATTAATTATCCACGTGCTCATGCTGATTTTGCTCATTGTGTTGCTAGCCTCACTTCTTTGTATTGCAATTCAAGCACATGAGGAGACCCTTGCCAATACCTCGGAAAATTTTCATGATGAGAGATCCCAACTAATTGTGGAGCAAGTGTCCTCAGAATCAGATACTAACAAACAGAGGACTCTGCAACTGGGAGGAAACTTGAACCTTTTGCAAGCAGCACAAACTCTAAACTTTTGGATTTTGTTTTTGTCTGTGGCATGTGCCATGGGATCAGGACTTGCAACTATTAATAATATCAGCCAAATAGGGGAATCCCTCGGTTACACCGTGCGCGAGACAGATTCCTTAGTTTCATTGTGGAGCATTTGGAACTTCGCTGGGCGTTTCGGAGGTGGTTATATCTCGGATCACTTCTTACACACAAGAGGATGGGCAAGACCTTTGTTTATGGTCATCACCTTAATGGTCATGAGCATTGGCCATTTGATTATTGCTTCTGGATTGCAGGGTGCTCTATATGTTGGTTCAGTTTTGGTGGGTATCTGTTATGGCTCTCAGTGGTCAATAATGCCCACAATCGCTTCTGAGATATTTGGTGTGGGAAATATGGGTAGCATATATAACACCATTACAATAGCAAGTCCTGTGGGATCTTACATATTTTCAGTGAGAGTTGTTGGGTATATATATGACAAAGAAGCATCAGAGGGAAACATTTGCATTGGAACTCATTGTTTCATGTTGTCTTTCCTTATAATGGCATCTGCCACTGTTTTGGGTTCTCTGGCAGCTCTTGCCCACGAAATTACTCGTATCTGTTATCTTGTTGAGACGCCACCACCATCTTCACTTGAGCTTGTTTTCTACTTTGGAAGCAAGATGTCTGTGTTGCTGAAAGCGTTGCCTTTGGTGGCCCTCCGCCAAAGGCCGTCATCGTTCTTCTTCCTCTGCAGCGTTTCCACCACCACTCCAAGGGTTCTTTCCAGAACAAGAACTCTGTCTTGCGTTTCTGCTTCTGCTTCTGCGTCTGCTTCAACTTCAACGTCTCATTTGACACAACCACCTCCTCCTTCTTCTGAAGCACAAGCACTCTCGTCCAACGCTAAGACTTGGTCTCAGTCACTTTCTTGGGTTTCTAGAACTGCTTTCTGCGGTGAGTTGTCCTCAATCGATGTGGGAAAAAAGGTTCAGCTTTGTGGCTGGGTTGCACTTCACAGGGTCCATGGTGGCCTCACATTTCTCAATCTTAGGGACCATACTGGTATTGTTCAGGTTACGACCCTTCCAGAAGAATTTCCAGATGCGCATTCTGCTATCAATAACTTGAGACTCGAGTATGTGGTTGCAATTGACGGTGTTGTCAGGTCTAGGCCAAACGAGTCAATCAATAAGAATATGAAAACAGGCTCCATTGAGGTTGCTGCTACTAGTGTTCTAGTGTTAAATGCTGTAAATTCAAAGTTGCCATTCTTAGTTACTACAGCAGATGATGCAAAAGATTCTCTTAAAGAGGAAATCCGTTTGAGGTATCGATGCCTTGATCTACGGCGGCAACAAATGAGTTTCAACATATTGCTGCGACATAAAGTTGTTAAACTCATTCGGAGATATCTAGAAGACATCCATGGTTTTGTTGAGATTGAAACTCCAATACTGTCTAAATCCACGCCAGAAGGTGCCCGGGATTATTTAGTTCCTTCAAGAACCCAGCCAGGAACATTCTACGCCTTGCCACAAAGTCCACAGTTATTTAAACAAATGCTAATGGTAGCAGGTTTTGATAAATATTATCAGTTAGCAAGGTGTTTTCGTGATGAAGATTTAAGAGCAGATAGACAACCTGAGTTCACCCAGCTAGATATGGAAATGGCTTTTACTCCTTTAGAGGATATGTTATCTCTAAATGAAGAATTGATCAGAAAGGTTTTCCTTGATATTAAAGGGGTGGAATTACCAAACCCTTTTCCCAGGCTTACATATGCTGAAGCAATGAGCAGATATGGCTCAGACAGGCCGGATACCAGATTTGATCTCGAGTTAAAGGATTTATCTGACCTTTTCTTAGGGTCATCCTTCAGAGTTTTCTCTGATTCTTTGGAAAGTGGGGGAATTATTAAAGTGTTGTGTATACCTTCTGGTGCAAAAAGATACTCAAATTCAGCTCTCAAGAAAGGTGATATTTTTAATGAAGCGATGAGAGCTGGTGCTAAGGGTTTACCTTTCCTTAAGGTTTTGGATAATGGGGAGATTGACGGAATCGCTGCTTTGATATCGAGTATGGATGCTACAACTAGAGAGAATTTGTTAAAACAATGCTCTGCTGCACCCGGTGATCTGATCTTATTTGCAGTGGGTCATCATGCGTCTGTTAATAGAACTCTAGACCGTCTTAGACTTTATGTTGCCAATGACCTTGGCTTGATTGACCATGGCAGGCATTCAATTTTGTGGATTACTGATTTTCCAATGTTTGAGTGGAATGATACAGAGCAGCGGCTTGAGGCTTTGCATCATCCTTTCACTGCACCAAATCCTGAAGACATGAATGACCTTGCATCTGCTCGTGCATTGGCTTATGACATGGTTTACAATGGGGTGGAGATTGGCGGTGGAAGTCTAAGAATTTATAAGCGTGATATACAACAAAAGGTTTTGGAGATTGTTGGAATCTCAATTGAGCAGGCTGAATCGAAGTTTGGTTATCTTCTTGAAGCGCTTGACATGGGGGCTCCACCACATGGGGGGATAGCTTATGGGTTGGACAGAATGGTAATGTTGTTGGCCGGGGCTAACTCCATAAGGGATGTGATTGCATTCCCAAAGACAACAACTGCACAGTGTGCCCTCACAAGGTCACCATCTGAGGTCGATCCCCAGCAGCTCCAAGATCTCTCTATTGCAACTTCACACCAACATTGA 3639 0.4444 MDWRKLSSYAKSKWISTVASTWIQCSSGSLYTFSIYSQTLKSTLHYDQSTLTTVSVWKDVGINAGVLCGLLYDFAARRTANGPWLIHLLGSAQCFLGYFLMWAAVAGVIAPVPVPVMCLFMYVTAQAQGYFNTSNVVTGVHNFPDYRGTIVGIMKGFLGLSGAILVQVYRTIFNNKPKAYLLMLALLPPINTLLLMWFVRIHNTREGDERKYLNMFSSMAVVVAAYLMTVIILENILRVPLIIHVLMLILLIVLLASLLCIAIQAHEETLANTSENFHDERSQLIVEQVSSESDTNKQRTLQLGGNLNLLQAAQTLNFWILFLSVACAMGSGLATINNISQIGESLGYTVRETDSLVSLWSIWNFAGRFGGGYISDHFLHTRGWARPLFMVITLMVMSIGHLIIASGLQGALYVGSVLVGICYGSQWSIMPTIASEIFGVGNMGSIYNTITIASPVGSYIFSVRVVGYIYDKEASEGNICIGTHCFMLSFLIMASATVLGSLAALAHEITRICYLVETPPPSSLELVFYFGSKMSVLLKALPLVALRQRPSSFFFLCSVSTTTPRVLSRTRTLSCVSASASASASTSTSHLTQPPPPSSEAQALSSNAKTWSQSLSWVSRTAFCGELSSIDVGKKVQLCGWVALHRVHGGLTFLNLRDHTGIVQVTTLPEEFPDAHSAINNLRLEYVVAIDGVVRSRPNESINKNMKTGSIEVAATSVLVLNAVNSKLPFLVTTADDAKDSLKEEIRLRYRCLDLRRQQMSFNILLRHKVVKLIRRYLEDIHGFVEIETPILSKSTPEGARDYLVPSRTQPGTFYALPQSPQLFKQMLMVAGFDKYYQLARCFRDEDLRADRQPEFTQLDMEMAFTPLEDMLSLNEELIRKVFLDIKGVELPNPFPRLTYAEAMSRYGSDRPDTRFDLELKDLSDLFLGSSFRVFSDSLESGGIIKVLCIPSGAKRYSNSALKKGDIFNEAMRAGAKGLPFLKVLDNGEIDGIAALISSMDATTRENLLKQCSAAPGDLILFAVGHHASVNRTLDRLRLYVANDLGLIDHGRHSILWITDFPMFEWNDTEQRLEALHHPFTAPNPEDMNDLASARALAYDMVYNGVEIGGGSLRIYKRDIQQKVLEIVGISIEQAESKFGYLLEALDMGAPPHGGIAYGLDRMVMLLAGANSIRDVIAFPKTTTAQCALTRSPSEVDPQQLQDLSIATSHQH 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03091 1212 Gene3D Bira Bifunctional Protein; Domain 2 738 1206 IPR045864 -
Adu05g03091 1212 PRINTS Aspartyl-tRNA synthetase signature 1099 1115 IPR002312 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Adu05g03091 1212 PRINTS Aspartyl-tRNA synthetase signature 1143 1157 IPR002312 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Adu05g03091 1212 PRINTS Aspartyl-tRNA synthetase signature 817 829 IPR002312 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Adu05g03091 1212 PRINTS Aspartyl-tRNA synthetase signature 834 847 IPR002312 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Adu05g03091 1212 SUPERFAMILY Nucleic acid-binding proteins 620 722 IPR012340 -
Adu05g03091 1212 CDD EcAspRS_like_N 620 760 - -
Adu05g03091 1212 Pfam OB-fold nucleic acid binding domain 636 718 IPR004365 GO:0003676
Adu05g03091 1212 SUPERFAMILY Class II aaRS and biotin synthetases 744 1182 IPR045864 -
Adu05g03091 1212 TIGRFAM aspS_bact: aspartate--tRNA ligase 619 1208 IPR004524 GO:0005524|GO:0016874
Adu05g03091 1212 PANTHER ASPARTATE--TRNA LIGASE, MITOCHONDRIAL 603 1207 IPR004524 GO:0005524|GO:0016874
Adu05g03091 1212 CDD MFS_Mch1p_like 12 500 - -
Adu05g03091 1212 Hamap Aspartate--tRNA(Asp/Asn) ligase [aspS]. 619 1209 IPR004524 GO:0005524|GO:0016874
Adu05g03091 1212 Gene3D - 612 724 IPR012340 -
Adu05g03091 1212 SUPERFAMILY GAD domain-like 916 1048 IPR004115 GO:0004812|GO:0005524|GO:0005737
Adu05g03091 1212 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 766 1180 IPR006195 -
Adu05g03091 1212 Pfam Nodulin-like 13 263 IPR010658 -
Adu05g03091 1212 MobiDBLite consensus disorder prediction 586 605 - -
Adu05g03091 1212 Gene3D - 899 1048 IPR004115 GO:0004812|GO:0005524|GO:0005737
Adu05g03091 1212 PANTHER ASPARTYL/LYSYL-TRNA SYNTHETASE 603 1207 - -
Adu05g03091 1212 SUPERFAMILY MFS general substrate transporter 9 202 IPR036259 -
Adu05g03091 1212 CDD AspRS_core 764 1183 - -
Adu05g03091 1212 Pfam GAD domain 935 1034 IPR029351 -
Adu05g03091 1212 Gene3D MFS general substrate transporter like domains 208 501 IPR036259 -
Adu05g03091 1212 Pfam tRNA synthetases class II (D, K and N) 744 1183 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Adu05g03091 1212 SUPERFAMILY MFS general substrate transporter 213 505 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03091 Adu-Chr5 101738742 101758093 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03091 11 505 Nodulin-like Gene Family AT1G74780 55.750 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03091 K01876 - gmx:100803308 1133.24