Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03062 ATGGGAACTGCAGAAGAAAGAGCCATTGCTGTTATCATGGTTGGAGGCCCCACCAAAGGTACTAGATTCAGGCCATTGTCATTCGACATACCTAAGCCACTTTTTCCATTGGCGGGACAACCCATGGTCCATCACCCAATTTCTGCTTGTAAACGGATTCCTAATTTGGCTCAGATTTATCTAATTGGTTTCCATGAGGAGCGCGAATTTGCATTATTTGTTTCCTCCGTCTCAAACGAGCTTAAAGTCCCTATTAAATATCTGAAAGAAGACAAGCCTCATGGGTCAGCTGGTGGTCTTTATAGCTTTAGAGATCAAATCATGGAGGATGATCCGTCACATATTTTTTTGCTAAACTGTGATGTTTGCTGCAGCTTTCCACTACCGGAAATGCTCGATGCTCATAGAAAATATGGTGGGATGGGAACAATATTAGTTGTTAAGGTTTCGCCAGAGTCGGCCAGTGAATTTGGGGAATTGGTAGCTGATCCAGTAACCAATGAACTGTTGCATTACATTGAGAAACCTGAAACTTTTGTAAGTGATCTAATAAACTGTGGTGTGTATATATTTACACCAGATATATTTACTGCAATTGAGGGTGTTACTACTCAGCAGAAAAATAGAGCTAATCTAAGACGTGTCTCCAGCTTTGAAGCAATGCAGCCAGACACAAGGAATCTTTCTTCCGATTATGTCAGATTGGATCAAGATATCCTCTCACCTCTTGCAGGGAAGAAACAGTTATACATTTATGAAACCAAAGACTTCTGGGAACAAATCAAAACTCCTGGAATGTCCATAAAATGTTCTGCCTTGTATCTTTCCCAATTTCGTCCCATCTCGCCACAACTATTGGCAAATGGAGATGGTATTAAGAAAGCCAGCATCAGTGGTGATGTTTATATTCACCCATCTGCTAAAGTGCATCCAACAGCAAAGATTGGCCCTGGTGTATCAATATCTGCAAATGCTCGTATCGGAGCTGGTGCAAGGCTCATAAATTGTATCATCCTAGATGATGCAGAAATTAAGGAGAATGCTGTTGTCATTCATGCAATTGTCGGATGGAAATCTTCTATTGGACGCTGGGCCCGTATCCAGGCAAATTACAATGCAAAACTTGGGGTTACTTTGCTTGGAGAATCTGTGATAGTTGAGGATGAGGTTGTGGTTGTTAATAGCATTGTCCTTCCACACAAGACCTTAAATGTGAGAGTTCAAGATGAGATTCTTTTGCTCCAACGGCAGAAACGACGAACCAACGACAACCACGATGAACTAGCAGCAACAACGGCGAACGCGGCAATAACCCCTCCTTCTGTCGCATACCTTCTCTCTCTCTCTCTCTCTCTCTTCGGTGAGCCAGTGGCAGCAGCGGCTTTCCTCCTCGTTGTACTTTCCGTCGCATTTCTAAACCCTCACTTTCTTTGTTGGGGCTTGTTGAGGTCTGAGTGTGGTTTTGTGTTGGGTGTTGGGTTGTGTTGGATAAGGGATTCAAGTGGAAAGAGTTAA 1515 0.4297 MGTAEERAIAVIMVGGPTKGTRFRPLSFDIPKPLFPLAGQPMVHHPISACKRIPNLAQIYLIGFHEEREFALFVSSVSNELKVPIKYLKEDKPHGSAGGLYSFRDQIMEDDPSHIFLLNCDVCCSFPLPEMLDAHRKYGGMGTILVVKVSPESASEFGELVADPVTNELLHYIEKPETFVSDLINCGVYIFTPDIFTAIEGVTTQQKNRANLRRVSSFEAMQPDTRNLSSDYVRLDQDILSPLAGKKQLYIYETKDFWEQIKTPGMSIKCSALYLSQFRPISPQLLANGDGIKKASISGDVYIHPSAKVHPTAKIGPGVSISANARIGAGARLINCIILDDAEIKENAVVIHAIVGWKSSIGRWARIQANYNAKLGVTLLGESVIVEDEVVVVNSIVLPHKTLNVRVQDEILLLQRQKRRTNDNHDELAATTANAAITPPSVAYLLSLSLSLFGEPVAAAAFLLVVLSVAFLNPHFLCWGLLRSECGFVLGVGLCWIRDSSGKS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03062 504 Pfam Nucleotidyl transferase 10 212 IPR005835 GO:0009058|GO:0016779
Adu05g03062 504 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 9 277 IPR029044 -
Adu05g03062 504 Gene3D Hexapeptide repeat proteins 286 414 - -
Adu05g03062 504 SUPERFAMILY Nucleotide-diphospho-sugar transferases 9 357 IPR029044 -
Adu05g03062 504 CDD M1P_guanylylT_A_like_N 10 274 - -
Adu05g03062 504 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 6 413 - -
Adu05g03062 504 PANTHER BNAA07G31840D PROTEIN 6 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03062 Adu-Chr5 101289450 101321570 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03062 20 436 Eukaryotic Initiation Factors Gene Family AT2G34970 23.404 3.93e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03062 K00966 - gmx:100780801 718.383