Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03018 ATGCCTGCAGCCTCTTCCTCTCCACCCCCTGCACCAAAGTCTGGTGATGGCCCTACCCTGTTTCCAAAGGCTACTTCCACTGCCAGGTGTACTCCAATTTCCAACCCAGCCCCTTGTCTTCAGGTTGATGATCCTCCCTTTCAGTCACTTCCGACACATATAGAGACTGCCGAAAAGCCGGCATATACATCAATTCCATCTTCTGCCTTGCAACCTATAACAGGTATCGAAATTCAGCTTCCGCTTGTGGAACCTGAGTCTCAACAAACTCAAAATTCAACTTCCATTTCTTCTTCTCACAATTCAAATACTCACCAAATGTTGACAAGGTCTAAAACTCACTCCTCAAGGCCAAGAGCATTAGCAGCCACCATTTTTAATAACAATTTTCTTGAACAACCTCCAAAATCAGCTGCTGCTGctcaaaaaattcctcattggcatcatgctatgaatgaagaatttagagccttggtgaagaataacacttggaccttggtaccaacaccttctaatgctaagGAGCAAAGCGATAATTTACCAGTGCGAGCTCGCTGCCGCTTCTGCCCCCTTGGCTTCTACACTGCAACCATGATCATTCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTATTCCAAGAGGGAGTATGCTACGCGAAGAAGGACTTCAATCTTGCGAAGCACCCTGAGATTGATGTGCCGAATCTGCAGGTGATTAAACTGATGCAGAGCTTCAAGTCGAAGGAGTACGTCAGGGAGACGTTTGCCTGGATGCACTATTACTGGTTCCTCACCAACGATGGCATCGAGCATCTCAGGACATACCTCAACCTTCCTTCTGAGATCGTCCCCGCCACTCTCAAGAAGCAAGCCAAGCCACCTGGCAGGCCTTTTGGCGGCCCACCGGGTGACCGCCCCAGGGGTCCACCTCGCTTTGATGGAGAGCGTAGATTCGGTGACCGTGATGGATACCGCGGAGGCCCACGAGGACCTGGCGGTGATTTTGGAGGAGACAAGGGTGGTGCTCCTGCTGACTACAGACCTTCTTTTGGGGGTGCTGGTGGAAGGCCTGGCTTTGGTCGGGGTGCTGGTGGTTTTGGAGGCAGCGCTCCAACAAGCTCAAACGCTCCTTAA 1137 0.4688 MPAASSSPPPAPKSGDGPTLFPKATSTARCTPISNPAPCLQVDDPPFQSLPTHIETAEKPAYTSIPSSALQPITGIEIQLPLVEPESQQTQNSTSISSSHNSNTHQMLTRSKTHSSRPRALAATIFNNNFLEQPPKSAAAAQKIPHWHHAMNEEFRALVKNNTWTLVPTPSNAKEQSDNLPVRARCRFCPLGFYTATMIIPEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEHLRTYLNLPSEIVPATLKKQAKPPGRPFGGPPGDRPRGPPRFDGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGAGGRPGFGRGAGGFGGSAPTSSNAP 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03018 378 MobiDBLite consensus disorder prediction 287 378 - -
Adu05g03018 378 Gene3D - 198 301 IPR036388 -
Adu05g03018 378 Pfam Plectin/S10 domain 200 291 IPR005326 -
Adu05g03018 378 MobiDBLite consensus disorder prediction 1 46 - -
Adu05g03018 378 MobiDBLite consensus disorder prediction 309 325 - -
Adu05g03018 378 MobiDBLite consensus disorder prediction 1 16 - -
Adu05g03018 378 MobiDBLite consensus disorder prediction 85 117 - -
Adu05g03018 378 MobiDBLite consensus disorder prediction 20 34 - -
Adu05g03018 378 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 142 378 - -
Adu05g03018 378 PANTHER 40S RIBOSOMAL PROTEIN S10 142 378 IPR037447 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03018 Adu-Chr5 100328754 100335200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03018 198 351 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 83.226 6.64e-74 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03018 K02947 K09422 bvg:104888371 224.942