Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02990 ATGCATGGGTCCGGTTCTGAGGAGTGGAAACACAGCCGGCACATGTGGCCCAACGCCACTGCTGTAGCCCCCGATTCTTCACCGTCTCAATTTATATGCAAAGATGGACGCAAGATTTATGTTGGTGATTGTGCACTTTTCAAGCCACCCCGGCATTCCCCACCTTTTATTGGAATAATTCGCAAGTTAATATTTAATAAAGAAGAAAGTCCAACTTTAGAAGTTAATTGGCTTTACCGACATGCTGATGTGAAGCTTACCAAGGGCGTATTGGAAGCTGCCCCAAACGAAGTCTTCTACTCATATCACAAGAATGAAATATCTGCTTCATCATTACTCCATCCGTGTAAAGTCGCGTTCCTTCGTAAAGGTGTTGAACTTCCTTCAGGGATATCTGCGTTTGTCTGCAGGCGAGTGTATGACACTGAGAACAACTGTATATGGTGGCTAACCGATAAGGAATACATTAATGCTGTTCCGGAAGAAGTTGACCGGTTATTAGACAAGACAAAACTAGAAATGCATGGGGCAGCGCAGTCGGGAGGCCGTTCTCCAAAACCTTTGAATGGTCCGACATCAACACAATCTTTGAAATCTGGTTCTGATAGTGTTCAAAATAGTTCTTCCTTTGGTACACAGGTTAAAGGAAAAAAGAGAGAAAGGGGTGATCAGGGTTCTGATTTATCTAAACGAGAGCGACTATTTAAAGCAGAAGATGGGGATTTTGGCCCAGTTAGATCTGAGAGCATGTTGAGGAGTGAGATCAGTAAAATTACTGACAAAGGTGGGCTTGTAGACTTTGAAGGAGTTGAAAGACTTGTACAACTCATGCAACCTGATGGTGCTGATAAAAAAATAGATTTGGGTGGGAGAATAATCCTTGTTAATGCAATAGCAGCAACCGAGCGTGATGATTGTCTTAGCTGGTTTGTACAGCTCAGGGGTTTACCTGTGCTGGATGAATGGCTCCAGGAGGTTCACAAGGGAAAAAATGGTGATAGTAATACCCCTAAAGAAAGCGACAAATCAGTTGAGGAATTTTTGTTAGCCTTGCTTCGTGCATTGGATAGGCTTCCTGTGAACCTTCATGCATTGCAAACATGCAATGTTGGGAAGTCTGTTAATCATTTACGCACTCACAAAAATTCTGAAATTCAGAGGAAAGCTAGGAGTTTAGTAGATACATGGAAGAAACGTGTTGAGGCTGAAATGAATATGACCGATTCGAAATCTGGTTCTACACGTCCTGTGTCTTGGCAAGCAAAACCGGCAGCTTCTGAGATCTCTCATGTTGGAAATAAGAAAACTGGAGGATCTGAGAATGCTACAAAGGGATCTGCAATTCAATCATCAGTATCCAAAAATTCATTGGCTAAGCATGGTTCTGGGGAAGCATTGTCCAAGTCTTCTTCAGCTCCTAGCTCAATTAAATTGATGACTACCTCAATGGGCTGTACCCCTAAAGATCAGAATGTGAAGGCATTAGGTGGTGCCCCAGCATCAGATCAACCTCTGACACCTATCAAGGAGGAAAGGAGCAGCAGTTCTAGTCAGTCCCAAAACAACAGCTTATCTTGTTCTAGTGAACATGCAAAAACAATTGGGTCTTGTAGGGAAGATTCTAGGAGTTCCACTGCTGTGTCAATGAGTGCGAGCAAAATACCTGGTGGTACATCTCGAACTCGGAAGTCAAGCAATGGAGTACATGGGGCTGGTGTTGCACTTGCTCAGAAGGAGCCCACCTCGGTAAAAGGCTCTACTAGAAACTCACCTTCTGAAAAAGTTTCACCAACTCGAGTTTCCCACGAAAAATCTTTTGATCCGCCACTTACTGATCAAGGGAATAATCAACGCCTTATTCTCAGACTGCCAAATACTGCCCGTAGTCCTTCAAGGGGAGCAAGCGGTGCTGCTTCTGAAGAACCTGCTATTCCTTGTGGCATAGCTTCGCCTCCTGCCGACAAGAATGAGTCTCGGGATAGAAGAGTTAAAGGTTCAACTGGCTGTGAGCATGGTAAGGGCTCTCCGATAGCTGATGAACAGGGAAGGATTAATGAAGATGGTGATCAGGTACCAGAAACATCGAAACAGAGTAATCTGTCATCAGGATTTATTTCCAGATCAGGGCAGACATATGCTGCTTCTTTAAGCCCTATGAATGCATTAGTTGAAAGTTGTGTCAAATTCTCCGAAGCTAGTGCCTCTGTCTCTGCTGGTGATGATGGGATGAACTTACTTGCTACCGTAGCTGCAGGCGAGATATCCACATCTGGAAATGTCTCTCCTCTGGCTTCACCTGAGAGGAAGTCTCCTGTGGTAGATGAATCCAGCTCTGGCAATGTTTCCAAGTTAAAGCATCCGGGTGAAATAGCTGCTCACACTGTTACACAATCTGATAGAAGGGCATCAGCAGAGCCTCTGTTGAATGCTGTTGATCCAGTGCAATTTAAAAATGATTCAAGGCACCCTGTGACCACAATATCACGTGGTTCTGCTGGAGAAGAAGCAAATTCAACCAGTTGTAAAGAGAAAACTGGTGATAACGGGCCCCAAATGAATGTCTCTACTGCAGATTTGTCACAAAATGCTGAATCTCCTCGCATACGGCCAGAAATTGCTGAGAGTGCTTCTGAAACTGTACCACCAGCTAAAAAGGAGACTTGGGAAGAGCCTGGAGGAGAGAACCATTTTCATGTGCAGAGGGATTTTGGAAGTCAATGGGTTAAACCCAGCAGTTCAGACTCTAAAAAGGAGATGGTTGATCACTTGGATGAGGCAGTCGTGAAGAATGATGAAATGCTAGTTTCCAAAGAGACCATTGCAGGTGTAAAGATTGAAAAGGAGTTAGGTGAAAAATTACTCGAGTTATCTTCAGATGTAGGTAAGGATAACAAGATCAGTACAGAGGTTACTGGCGTATCAGTGCAAAAATCATCTGTTGCAGAAAGCAGCGAGTCTGTAGAGTTTAAAAAGGTGGATGTGACGCCGCCTTCTGCTTCTGCGTTGTCCAAAGTTCCCGGGAAAGAAAATGAAGTGTCTAAAACTTCTGTGTGCAACTTAGATGGAAAGGAATCTGATGTTGCAGGTGAGCAGCATGCCCACAGTATTCATCCATCCCTCACTGTTGCTGGGTCTGATGCAGGTGTAATATTAGACTTCGATCTAAATGAGGGCTTCGCTGTTGATGATGCTAGCCATGGGGAGATTGTTCGGCAGGAAGAACACACCACATCATCTGCGGTCCATAATCCTTGTGCATTGCCTTTTCCCATTTCATCCATCTCTGGGGGATTCCATACAACAATTACAGTGGCATCTGCTGTCAAGGGGCGAGTTGTTCTACCAGAAAACCCATTGCGCAGTAAGGGTGAACTTGGATGGAAAGGCTCTGCTGCAACAAGTGCCTTCCGGCCAGCTGAACCTAGGAAAAATTCAGAGACACCGTCAACTACTGGAGATATTCCTTCTGTTGATTCCACATCTTCAAAACAAGGCCGTGCTCCTTTAGATTTTGATTTGAATGTTGCTGATGAAAGAAGTTTTGAGGATGTAGGTTCCCATGGTTCTTCAGAATCTGGGCCACCTGATCGCAGCACGATGGGACTTGATCTTGATTTGAACAGAGTTGATGAGACTCCTGATGCTGTTTCTTACTCTATGAGTAAACTGGATGCTCCTACATTGCCAAGCCTTGATGAAGTTGGCACAGAGGTCCCAACTCGAATTCAGCAGATGAAAAATAGTGCACCGATTCCATCTGCCATCCATGGTACAAGAGCCAACAATGCTGAATATGGGAATTATTCATCATGGTTTCCCCCAGGAAATTCTTATTCTGCAATTACTGTCCCTCCACTTCTTCCTGGTAGAGGTGAACAGAGTTATGTTGCAGCTGCTGGAGCACAGCGGATAATGGGTCCCACTGGTAGTGCAGCGTTTGGTCCTGAACTCTACCGGGGGCCAGTGCTTTCATCTGCTCCTGCTGTTGCTTACCAACCTACTGCAGCACCCTTTCCATATCCAGGAGGATTTCCATTTGAAACTAGTTTTCCATTATCTTCAAACTCCTTTTCTGTTGGTTCAGCAACATTTATTGATTCATCAACAGTTGGTGGACTTTGCTTTCCTACTATGCCGTCGCAGCCAGTTGCACCTGGTGGTGTTGTCTCCTCAACATATCCGCGTCCATATGTCATGAGTCTTCCTGGGGGTACAAGTAATGTGATTCCTGACACCCGAAAATGGGGAAGTCAAAGTCTGGATCTTAATTCAGGCCCCGGTGGTACAGATACAGACAGGAGAGAGGAACATATGAAGATGTTTCAGGTGGCAGTAGGATCATGGCTCTTCAAAACTAATATAGAAGTGGAGCTTTTTGTGGAAAGTGCTGGAAATATTGATGATAATGTTTGCATGCCGAGTGTCAACTGTGTTGGGCCATGA 4443 0.4468 MHGSGSEEWKHSRHMWPNATAVAPDSSPSQFICKDGRKIYVGDCALFKPPRHSPPFIGIIRKLIFNKEESPTLEVNWLYRHADVKLTKGVLEAAPNEVFYSYHKNEISASSLLHPCKVAFLRKGVELPSGISAFVCRRVYDTENNCIWWLTDKEYINAVPEEVDRLLDKTKLEMHGAAQSGGRSPKPLNGPTSTQSLKSGSDSVQNSSSFGTQVKGKKRERGDQGSDLSKRERLFKAEDGDFGPVRSESMLRSEISKITDKGGLVDFEGVERLVQLMQPDGADKKIDLGGRIILVNAIAATERDDCLSWFVQLRGLPVLDEWLQEVHKGKNGDSNTPKESDKSVEEFLLALLRALDRLPVNLHALQTCNVGKSVNHLRTHKNSEIQRKARSLVDTWKKRVEAEMNMTDSKSGSTRPVSWQAKPAASEISHVGNKKTGGSENATKGSAIQSSVSKNSLAKHGSGEALSKSSSAPSSIKLMTTSMGCTPKDQNVKALGGAPASDQPLTPIKEERSSSSSQSQNNSLSCSSEHAKTIGSCREDSRSSTAVSMSASKIPGGTSRTRKSSNGVHGAGVALAQKEPTSVKGSTRNSPSEKVSPTRVSHEKSFDPPLTDQGNNQRLILRLPNTARSPSRGASGAASEEPAIPCGIASPPADKNESRDRRVKGSTGCEHGKGSPIADEQGRINEDGDQVPETSKQSNLSSGFISRSGQTYAASLSPMNALVESCVKFSEASASVSAGDDGMNLLATVAAGEISTSGNVSPLASPERKSPVVDESSSGNVSKLKHPGEIAAHTVTQSDRRASAEPLLNAVDPVQFKNDSRHPVTTISRGSAGEEANSTSCKEKTGDNGPQMNVSTADLSQNAESPRIRPEIAESASETVPPAKKETWEEPGGENHFHVQRDFGSQWVKPSSSDSKKEMVDHLDEAVVKNDEMLVSKETIAGVKIEKELGEKLLELSSDVGKDNKISTEVTGVSVQKSSVAESSESVEFKKVDVTPPSASALSKVPGKENEVSKTSVCNLDGKESDVAGEQHAHSIHPSLTVAGSDAGVILDFDLNEGFAVDDASHGEIVRQEEHTTSSAVHNPCALPFPISSISGGFHTTITVASAVKGRVVLPENPLRSKGELGWKGSAATSAFRPAEPRKNSETPSTTGDIPSVDSTSSKQGRAPLDFDLNVADERSFEDVGSHGSSESGPPDRSTMGLDLDLNRVDETPDAVSYSMSKLDAPTLPSLDEVGTEVPTRIQQMKNSAPIPSAIHGTRANNAEYGNYSSWFPPGNSYSAITVPPLLPGRGEQSYVAAAGAQRIMGPTGSAAFGPELYRGPVLSSAPAVAYQPTAAPFPYPGGFPFETSFPLSSNSFSVGSATFIDSSTVGGLCFPTMPSQPVAPGGVVSSTYPRPYVMSLPGGTSNVIPDTRKWGSQSLDLNSGPGGTDTDRREEHMKMFQVAVGSWLFKTNIEVELFVESAGNIDDNVCMPSVNCVGP 1480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02990 1480 MobiDBLite consensus disorder prediction 676 690 - -
Adu05g02990 1480 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 991 - -
Adu05g02990 1480 MobiDBLite consensus disorder prediction 1180 1202 - -
Adu05g02990 1480 MobiDBLite consensus disorder prediction 404 704 - -
Adu05g02990 1480 SMART TFS2_5 323 402 IPR003617 GO:0005634
Adu05g02990 1480 MobiDBLite consensus disorder prediction 654 668 - -
Adu05g02990 1480 MobiDBLite consensus disorder prediction 883 897 - -
Adu05g02990 1480 MobiDBLite consensus disorder prediction 608 633 - -
Adu05g02990 1480 Pfam BAH domain 38 144 IPR001025 GO:0003682
Adu05g02990 1480 MobiDBLite consensus disorder prediction 819 863 - -
Adu05g02990 1480 Gene3D - 21 235 IPR043151 -
Adu05g02990 1480 MobiDBLite consensus disorder prediction 1143 1167 - -
Adu05g02990 1480 CDD TFIIS_I 359 401 - -
Adu05g02990 1480 MobiDBLite consensus disorder prediction 174 233 - -
Adu05g02990 1480 MobiDBLite consensus disorder prediction 214 233 - -
Adu05g02990 1480 MobiDBLite consensus disorder prediction 185 213 - -
Adu05g02990 1480 PANTHER BAH DOMAIN-CONTAINING PROTEIN 1 991 - -
Adu05g02990 1480 MobiDBLite consensus disorder prediction 580 596 - -
Adu05g02990 1480 MobiDBLite consensus disorder prediction 507 566 - -
Adu05g02990 1480 ProSiteProfiles TFIIS N-terminal domain profile. 324 403 IPR017923 -
Adu05g02990 1480 MobiDBLite consensus disorder prediction 406 420 - -
Adu05g02990 1480 MobiDBLite consensus disorder prediction 1119 1168 - -
Adu05g02990 1480 ProSiteProfiles BAH domain profile. 37 151 IPR001025 GO:0003682
Adu05g02990 1480 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 306 413 IPR035441 -
Adu05g02990 1480 SMART BAH_4 37 151 IPR001025 GO:0003682
Adu05g02990 1480 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 270 404 IPR035441 -
Adu05g02990 1480 MobiDBLite consensus disorder prediction 432 488 - -
Adu05g02990 1480 Pfam TFIIS helical bundle-like domain 351 400 IPR017923 -
Adu05g02990 1480 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1229 1439 - -
Adu05g02990 1480 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 995 1230 - -
Adu05g02990 1480 MobiDBLite consensus disorder prediction 756 914 - -
Adu05g02990 1480 PANTHER BAH DOMAIN-CONTAINING PROTEIN 1229 1439 - -
Adu05g02990 1480 PANTHER BAH DOMAIN-CONTAINING PROTEIN 995 1230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02990 Adu-Chr5 99864326 99871242 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Adu05g02990 BAH 6.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02990 - - ahf:112750750 2071.97