LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu05g02967	ATGGCAAGAAGATGGTCCTTCTACAAGAATCTGCTTCCAATCTTGTTGCTTATTAGTATAGAGTGCAATGATATGGGGTTACTCACTTTGTTCAAAGCAGCCACCAATAAAGGCATGAGCAACCATGTGTTTGTTGCATATGCTTATGCTATTGCTACTATTGTTCTTATTCCTGCACCTTTCATCTCCAAAAGATCAAGAGTGGTTCCTCCACTCAGTTTCTCCATACTTTCCAAAATTGTCCTTCTTGGGATCATAGGAAGTTCATCTCAAATTCTGGGGTATGCTGGAATCAGTTACAGTTCTCCAACACTTGCTTCATCAATTGGCAACTTGGTTCCTGCTTTCACCTTCTTGCTTGCAGTCTTTTTCAGGATGGAAAAGATAGATGTAAAAAGTAGAACTAGTCAAGCTAAGGTAATGGGAAGCATAATATCAATAGCAGGAGCATTTGTGTTGACTTTCTACAAAGGTCCATCTATCAGCAACAATTCTCATACCAAAATTACCTCATTGCCCCTGCTTCAGCAACCAATTAACCTTCCCAGAGCAGTGGACACAAATTGGGTCCTTGCTGGAATTCTTCTAACAGCTGACTATTTACTTTTTTCAATATGGTACATTTTACAGGTGGATGTATTGAAGGATTACCCAGATGAACTAAGTATGCTCTTCTTTTACAACGTGACTTCAACCATCATATCTACAATTGTAGGTTCAATTTTAGAGCCTAATGCAAGTGCTTGGAAGATAAGGCTAGACATTTCATTGGTCTCCATTCTTTGCTCAGGAATATTTAATAAGTTCTTGAGCAGTGCAATATATGCATGGGGAATACACTTAAAGGGTCCTGTATATGTAGCAATGTTCAAGCCACTCTCAATTGTTATTGCTGTTGCCATGGGTATCATGTTCCTTGGGGATATTCTACATGTTGGAAGCATAATTGGAGCTACTGTAATATCAATTGGATTTTACACTGTAATGTGGGGCAAAGCAACAGAGGAGAAGGAGGAAGAAGTTGTTGGAAGCCATGAATCACCAACTACTGAGCATGAACATGTTCCTCTCTTGCAAAACTGTAAAACAGTAAATTCTCAAAAGAATGTAGATGTAAATGTATGGTAG	1128	0.3883	MARRWSFYKNLLPILLLISIECNDMGLLTLFKAATNKGMSNHVFVAYAYAIATIVLIPAPFISKRSRVVPPLSFSILSKIVLLGIIGSSSQILGYAGISYSSPTLASSIGNLVPAFTFLLAVFFRMEKIDVKSRTSQAKVMGSIISIAGAFVLTFYKGPSISNNSHTKITSLPLLQQPINLPRAVDTNWVLAGILLTADYLLFSIWYILQVDVLKDYPDELSMLFFYNVTSTIISTIVGSILEPNASAWKIRLDISLVSILCSGIFNKFLSSAIYAWGIHLKGPVYVAMFKPLSIVIAVAMGIMFLGDILHVGSIIGATVISIGFYTVMWGKATEEKEEEVVGSHESPTTEHEHVPLLQNCKTVNSQKNVDVNVW	375

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Adu05g02967	375	PANTHER	WAT1-RELATED PROTEIN	9	359	-	-
Adu05g02967	375	PANTHER	WAT1-RELATED PROTEIN	9	359	IPR030184	GO:0016021\|GO:0022857
Adu05g02967	375	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	243	333	-	-
Adu05g02967	375	Pfam	EamA-like transporter family	26	154	IPR000620	GO:0016020\|GO:0016021
Adu05g02967	375	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	49	156	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu05g02967	Adu-Chr5	99611134	99632856	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu05g02967	1	362	Nodulin-like Gene Family	AT3G28050	48.525	1.03e-116	342

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu05g02967	-		-	gmx:100790743	488.419

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Adu05g02967	05	99611134	99632856	Adu05g02967	05	99611134	99632856	ECH

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