Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02966 ATGCACCAAAATTGGATTTTTGAGCACACCCATTTGAAGATGGCATGGATTCACCACCATATTCAACAAAAAGATGGTTACTTGAGCTACTACTACCCTCCACCACCACCACTACCACCACTATTACCGCCACCATATTTGTCCACACCTTCAACATCTTCTTCAGCTTCATCTTCATCTTCATCTTCATCACCATCTTCTGGTACTAGGATTAGTCCTGCTGTTCTTTTCATAATAGTAATTCTTGCAGTTTTATTCTTCATCTCTGGTGTCCTCCATCTGCTTGTTAGATTTCTCATGAAGCACCCGGTTTTTCAGTATAAGGAGATTGTGGGGCTGAAGGAGCCATTTGATTGTGCTGTTTGTCTGTGTGAGTTTTCTGAGAAGGATAACCTCAGGTTGTTGCCTATGTGCAGCCACGCCTTTCACATAAGTTGTATAGACACATGGCTTCTTTCGAATTCCACTTGCCCTCTTTGTAGAGGGACACTCCTTACTCCGGGGTTTTCGATGGAGAATCCAATGTTTGATTTTGATGATATGAGGGAAGATGAAGGGTGGCCTTGTGATGGTGAAAATGGATTTACAAATAGGCAGAAGAAAGCTGTGGTTGAAGAAATCAATGATGAGAAAAGGGGAATTTTCCCCGTAAGGCTCGGTAAATTCCGGAAGATGGATGTGGAGACTGGTGAGGAGGGTGTAGTAGTAGGAGAGACAAGTAGCAGTAATTTGGATGCAAGAAGGTGTTTTTCAATGGGATCTTATCAGTATGTTGTGGCCAATTCAGAACTCAGGATAGCCTTGAATCATGACCGGAGTGATCACAAATTGAGGCTTGCTGCTGAAGGAAAACAACATTCTGAGAAGGCTGCTTTGGAAGGGGATATGGATGCAAAGAATATTAGGAGTGATGAGGGAAGCCGAAGCAGCATGAAAGGCTGGGCACTTGGGGGTATTGGTGGTGGGATCCATGAAAGCTGTATAAAGGGAAGCCGTTGCAACTTCTTTAGGTGGGTTGATGATAATGGGTATGCAGCAGGGGCAGAAACTGATGCAGAGGTTGGTGGCGACTATGATGAATGGAGACTGAATGTGTCATGGAGATTGGGTAGCTTGGAGGGTGAAGTTAGAGCAATGAAATTGCTAATAATGTACGTCTCAGTTGCAATGGTTGTGGCTACTGTCTTTTGTGCATCACTATTATTCACATCAATCTCCAAGTAA 1224 0.4363 MHQNWIFEHTHLKMAWIHHHIQQKDGYLSYYYPPPPPLPPLLPPPYLSTPSTSSSASSSSSSSSPSSGTRISPAVLFIIVILAVLFFISGVLHLLVRFLMKHPVFQYKEIVGLKEPFDCAVCLCEFSEKDNLRLLPMCSHAFHISCIDTWLLSNSTCPLCRGTLLTPGFSMENPMFDFDDMREDEGWPCDGENGFTNRQKKAVVEEINDEKRGIFPVRLGKFRKMDVETGEEGVVVGETSSSNLDARRCFSMGSYQYVVANSELRIALNHDRSDHKLRLAAEGKQHSEKAALEGDMDAKNIRSDEGSRSSMKGWALGGIGGGIHESCIKGSRCNFFRWVDDNGYAAGAETDAEVGGDYDEWRLNVSWRLGSLEGEVRAMKLLIMYVSVAMVVATVFCASLLFTSISK 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02966 407 Pfam Ring finger domain 118 161 IPR001841 -
Adu05g02966 407 SUPERFAMILY RING/U-box 100 167 - -
Adu05g02966 407 CDD RING-H2_PA-TM-RING 118 161 - -
Adu05g02966 407 MobiDBLite consensus disorder prediction 47 68 - -
Adu05g02966 407 PANTHER RING-H2 FINGER PROTEIN ATL47-RELATED 103 308 - -
Adu05g02966 407 SMART ring_2 119 160 IPR001841 -
Adu05g02966 407 ProSiteProfiles Zinc finger RING-type profile. 119 161 IPR001841 -
Adu05g02966 407 MobiDBLite consensus disorder prediction 48 68 - -
Adu05g02966 407 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 103 308 - -
Adu05g02966 407 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 46 102 - -
Adu05g02966 407 PANTHER RING-H2 FINGER PROTEIN ATL47-RELATED 46 102 - -
Adu05g02966 407 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 166 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02966 Adu-Chr5 99586904 99591131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02966 82 259 C3H Transcription Factor Family AT2G18650 43.204 1.01e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02966 - - adu:107490806 515.768