Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02963 ATGTTTTGTCTAGCGCTGCGCCTCCCTCTCCTCAGTCCTCACTGTCCACCATCGACCGTCCTCTGCGCCGCCACGACGGAGGCTGGACGGTTCCCTCACCTAACTACTCCTCGTGGTTCTTCGCCTCCACCACCGTCCATTCGTCCACTCCTCTCTTCCTCGGTTACGCTGAAGGCTGAAGGTGCCTCACTACTCCTCGTGGTTCATCGCCGCTCGCCACCTTGTTTTTCCCCACTCCGGAGAACTCGACGCTTCACGTTGTTCCTCGTCGATGATCTGTGTTCCTTGCCGCTGTTCTGCGGTTCCTGCTTCTGCACCGCCGTTCTCCTTCTGCTTTACTTCGCTTCCTTCGACAAGGTTTCAACAATGGTTAGAAAAAAGGCAGAAGATGCAGGCCCATCAGCAAAAACTAAGGCAAGTAGCAAAGATGTCCCTAAGAAGGAAAAAGTTTCCATCTCGGCCATGCTGGCCAGCATGGATGAAAAGCCTGATAAACCCAAAAAGCCATCTTCCATTAAACCCAAGGCAAAAGCTGCTCCAAAACCTTCTGCATATACTGATGGTATTGATCTTCCTCCATCTGACGAAGATGAAGATGAAGCTCTCTTGGAGGAGGAGGAAGAGAATGCCTCCAAACGGCAGCAGAGGAGTGAGTTGAAGACACTTGAAATTTCAACCACAGACAAAGAGCTGAAGAAGCGTGAGAAGAAGGATATTTTAGCAGCTCATGCTGTTGAGCAGGCAAAGAAGGAAGCTCTTAAGGATGATCATGATGCTTTCACTGTGGTCATTGGAAGTCGGACTTCAGTGCTTGATGGAGATGATGATGCTGATGCTAATGTCAAAGATATAACAATAGAGAATTTCTCGGTGTCTGCTCGGGGTAAAGAACTTCTAAAGAATGCATCAGTGAAGATATCTCATGGGAAGAGGTATGGTTTGGTTGGACCCAATGGAAAGGGGAAGTCCACACTATTGAAGCTTCTTGCTTGGAGGAAGATACCGGTACCTAAGAATATTGATGTCCTTCTGGTTGAGCAAGAGGTAGTAGGTGATGATAAAACAGCACTGGAAGCTGTTGTGTCAGCTAATGAAGAACTGGTTCAAGTTCGACAAGAAGTTGCTTCTCTGCAAAATGCAGCTTCTGCAGAAGGAAGTGTTGACAATGAGGAAGATGATGCAGGAGAGAAGCTAGCAGAGCTGTACGAGAAACTACAGCTGATGGGTTCTGATGCTGCTGAAGCTCAAGCATCAAAGATTTTAGCGGGTTTGGGTTTTACAAAGGATATGCAGGGCCGGCCAACAAAATCTTTCAGTGGTGGATGGAGAATGAGGATTTCTTTAGCTCGAGCACTTTTTGTGGTGCCGACTTTGTTATTGCTTGATGAACCCACAAATCACCTTGACTTGAGGGCTGTTCTCTGGCTGGAAGAGTACCTGTGCCGTTGGAAGAAGACTTTGGTTGTTGTTTCACATGATAGGGATTTCCTCAATACAGTTTGCACTGAGATTATTCATCTTCATGACTTGAAACTCCATTTCTATCGTGGAAACTTTGATGACTTTGAGAGTGGGTATGAACAGCGTCGTAAAGAGATGAACAAGAAGTATGAGATTTATGACAAGCAACTAAAAGCTGCAAAAAGGAGTGGTAATCGAGCTCAGCAAGAAAAGGTGAAAGATCGAGCGAAGTTTGTGGCAGCTAAAGAAGCATCTAAAGCCAAGGGAAAGGGCAAGGGCAAGGTTGATGAAGATGAGGCCCCACCAGAGGTTCCACAGAAGTGGAGGGACTACAGTGTTGAATTTCACTTCCCTGAACCTACCGAGCTCACGCCTCCACTTCTTCAGCTTATTGAAGTGAGCTTCAGTTATCCAAACCGTGAGGACTTCAGACTGTCAAATATTGATGTTGGCATTGATATGGGAACTCGTGTTGCCATTGTTGGGCCTAATGGAGCTGGAAAATCTACACTACTGAACCTTCTGGCTGGTGATTTGGTTCCAAGTGAAGGTGAAGTTAGGAGAAGTCAGAAGTTGCGAATAGGAAGATACTCGCAACACTTTGTGGACCTTCTAACTATGGATGAAACCCCCGTTCAGTATCTTCTTCGTCTCCACCCAGACCAGGAAGGACTTAGCAAGCAAGAGGCCGTCCGTGCAAAACTCGGTAAGTTTGGGCTACCTAGTCATAACCATCTCACCCCTATTGCCAAACTATCAGGAGGGCAGAAGGCTAGGGTGGTATTTACCTCAATATCCATGTCAAGACCCCATATTTTGTTGTTGGATGAACCCACTAATCATCTAGACATGCAAAGTATTGATGCGTTGGCTGATGCACTAGACGAGTTCACTGGTGGAGTTGTTCTTGTTAGTCATGACTCGAGATTGATATCGCGTGTATGTGAGGATGAAGAAAGGAGTCAAATCTGGGTTGTCGAGGATGGTACTGTCAGGACTTCAATTGGAACATTCGATGATTACAAGGACGAGTTGATGAAAGAAATCAAAGCTGAAGTTGATGACTAA 2529 0.463 MFCLALRLPLLSPHCPPSTVLCAATTEAGRFPHLTTPRGSSPPPPSIRPLLSSSVTLKAEGASLLLVVHRRSPPCFSPLRRTRRFTLFLVDDLCSLPLFCGSCFCTAVLLLLYFASFDKVSTMVRKKAEDAGPSAKTKASSKDVPKKEKVSISAMLASMDEKPDKPKKPSSIKPKAKAAPKPSAYTDGIDLPPSDEDEDEALLEEEEENASKRQQRSELKTLEISTTDKELKKREKKDILAAHAVEQAKKEALKDDHDAFTVVIGSRTSVLDGDDDADANVKDITIENFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANEELVQVRQEVASLQNAASAEGSVDNEEDDAGEKLAELYEKLQLMGSDAAEAQASKILAGLGFTKDMQGRPTKSFSGGWRMRISLARALFVVPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIHLHDLKLHFYRGNFDDFESGYEQRRKEMNKKYEIYDKQLKAAKRSGNRAQQEKVKDRAKFVAAKEASKAKGKGKGKVDEDEAPPEVPQKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSNIDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSRPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEERSQIWVVEDGTVRTSIGTFDDYKDELMKEIKAEVDD 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02963 842 Pfam ABC transporter 632 767 IPR003439 GO:0005524
Adu05g02963 842 Coils Coil 202 222 - -
Adu05g02963 842 SMART AAA_5 308 510 IPR003593 -
Adu05g02963 842 SMART AAA_5 641 817 IPR003593 -
Adu05g02963 842 Gene3D - 281 562 IPR027417 -
Adu05g02963 842 PANTHER BNAA06G39310D PROTEIN 128 842 - -
Adu05g02963 842 MobiDBLite consensus disorder prediction 191 205 - -
Adu05g02963 842 MobiDBLite consensus disorder prediction 128 221 - -
Adu05g02963 842 Pfam ABC transporter 299 466 IPR003439 GO:0005524
Adu05g02963 842 ProSitePatterns ABC transporters family signature. 438 452 IPR017871 GO:0005524
Adu05g02963 842 MobiDBLite consensus disorder prediction 569 590 - -
Adu05g02963 842 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 594 824 IPR027417 -
Adu05g02963 842 Coils Coil 530 550 - -
Adu05g02963 842 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 284 541 IPR003439 GO:0005524
Adu05g02963 842 Gene3D - 581 842 IPR027417 -
Adu05g02963 842 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 128 842 - -
Adu05g02963 842 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 284 518 IPR027417 -
Adu05g02963 842 CDD ABCF_EF-3 615 817 - -
Adu05g02963 842 MobiDBLite consensus disorder prediction 206 221 - -
Adu05g02963 842 CDD ABCF_EF-3 284 511 - -
Adu05g02963 842 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 615 840 IPR003439 GO:0005524
Adu05g02963 842 Coils Coil 360 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02963 Adu-Chr5 99482089 99486267 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02963 614 827 Calmodulin-binding Proteins AT2G36910 29.583 4.44e-15 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02963 K06184 - gmx:100806865 1197.19