Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02956 ATGATCATGGAACTCACAGATTCCGGTTCCGCCGGCGACCGCACCACCGCTCCGCAGCCTCAAGACTCCCGCTCCTCCGGCCTTGAAATCGACCTCAACGAGATCCCTTACGCCGCAGCTTCACCTTCTTCCAACCACGCCGAAACCCTACCGCCGCCACCGGACTCCGCCGTCGACATCGTCCGCGCCTATCACGAGAACCCCGCGCCGCTACCAGGAGCTCCCGCCTCGCTACCCCGCGGCTCTGCTCCCTGTGCCACATGCTCTAAGCCGCCTGGTGCCGCCGGTGTTGTCGTCTGCGACGGCTGTGAGCGCGTGTTCCACATCGCATGTGCTGGGTTTCGCGGGACCCGCCAGGCGGCGATCCTTGATGAGTGGCTCTGCAGTGAGTGTGTCGTCGGCGGAGTGAGGAGCAAGAGGTGGCCGCTCGGCGTCAAGTCCAAGCAGCTCCTGGATATCAATGCCTCGCCGCCCAGTGATGCTGACGGAGAAGGTGCTGGCGAGGAGTTACAGGATTCGAGAAAGCACACTCTGGGTGATAATTCTTTTGGTGCCAATCCATTTGGTGCCCCAGTGACATGTTCAAACTACTACAATGGGAACACTTTTGGCTTCCAAAAGGCATCGGGAGTTGTAACACATGCTGTTAGAGTGGGTTTTGAGGATATACTGAATCATACCCAATCAATGACTAGATGCTTTGAGGAGGCTCTTAGAGACTTCATATCTGAAAGGCGTGGTGTGCTAGAGGAAGGTTGGCGAGTGGAATTTAGGCAATCCATGAACAGTTCTGAACTGTATGCAGTTTACTGTGCTCCTGATGGGAAAATTTTTGATTCTGTGTATGAAGTAGCTTGTTATTTGGGGCTAACATCTGGCTACAACTCTATGGAATCCGAAGTTAGAAATGATAGGTCTCTTGCTTCATTAGGTGGAACTCATCTATCCAGAAAAAGAAAGTCAACAAGGAATCTATCCAATGGTTTTGCAGAAAAATTAGGAACCTTGATCAATAGTTACTGTAGGGATTCTCCATCAGATGCTTTAACTGTGGAATGTACTGGTGATCATGGGCATGTCCACAAAGCCTCAGAAATTGCAAGAAAAGAGGATTGTCATTCAGGTTGTCTGCAATCTGCCGATAGACTTCCTCTACGGTTCGGCGATTTTTTTGTTCTTTCTTTGGGAAAAGTTGATGATAGACCTACATATTTTGATGTTCACCTTGTCTGTCCCATAGGTTATAAATCTTGTTGGCATGATAAGATTACTGGTTCTCTTTTTACATGTGAAGTTTTAGAGGGTGGTGATTCTGGACCTATATTTAGGATAAAAAGGTGCTCTTGTTCTGAGTTTCCTGTTCCAGTTGGGTCAACTGTCCTATCAATGTCAAATCTCTGTCAGTTTTTGAATAAAAATAATGGTGAGAGAAAGACTGATGATAGCATGGATTACGATGTTCATGAAAGTATCCAGATGATTCTTTCAGATCCTTGTGTGCCAACGGAAAATGATGTCATTAATTGTATTGCAAGTTTCTCAAATGAAACATGTGCTGGAGATTCAATATCCCAAGACTCAGGATTGATTGATGGAATTGGTGAAATTTTGGTGGAAGAGAGGTCATCATCTGCGGCTTGGAGAGTTATTTCTCAGAAGGTAGTAAATGCTTGCAATGATATCTGCAAGCAGAAAGGAAGCCTTAAGTTCTATTGTAAACATATTGAAGATGAACCGTGCTTACACAAATGGGACACAAATAGTAAAAAAAGTGATGCACACTTTTCTTTGTTGGATAAATTTTGTGGTTCACTATGTTCAGTTAGCGTTCCGGATGTAACTTATGCAGACAATGATCTAAAAGGTCTCTCTGAGGTTTTAGGAAACTGGCTGGAGCAAGATAGATTTGGATTAGATGTAGAATTTGTGCAAGAAGTATTGGAACAGCTTCCGGGTGTTAAAGAGTCTCTGAAGTATGAACTTCTAAGCAGTCGGAGTAATAGCTCATCATTGCCAACAGTTGAGAATGGTTTCCTAGTGGTTGAATGGAGAGGTGGATCACAATATCAGGATGAAAATGAAGCAGTTCAAGGTTCGTACAAGAAGCCCAGAAAAGTGGGACTGACTGAAAGAAGTGTCAGGGAAGATCGTTATCCACCTCCTGGGAAGTCGTTATGTTCTAGAGTTCCTAGTGAACTTATTGGTGACATTCTTCAGGTTTGGGAGCTTTTAGACCGATTTGATGAAATTCTGGACTTGAAAGAGCCGTTGTCGCTAGATGAGCTAGAGAAGGAACTTATCAACCCATGGTTTGATGAATTGGATTTGAATGAGAAATCTGAGAGGGACATTGATGCCGGTCAGGTTTTGAGTTCGCAAGGCACTGATGATGATTGTAGACCAACTCTGTCCCCAAGTTGTGACGCTGGCCCATCAAGATACAAAGAAAGTTCTCATGCCTTTATTCAAATGGAAACAGAAGCAATGAAAGAGGCAGCCCAAGTTAAGCTTGCATCTTTAACTTACGCTCGATGCTTTGGTGTAGCCTTGACAAAGGCCCATAATTCATTGCTAAGAGTGCTAGTTGGTGAACTGCAATCAAAGGTGGCTGCCCTGGTGGATCCAAATTTCGAACCTGGAGAGCCTAAAACAAGACGTGGAAGAAGGAAAGATATAGACAGTGCTATTCCTGCCAAACGTACAAAGCTCAATATGCTTCCTATTAATGAATTAACATGGCCAGAATTAGCTCGTCGATATATCTTGGCTGTCTTATCAATGGATGGGAACCTTGACTCAGCAGAAATTACTGCTCGTGAAAGTGGTAAAGTGTTTCGTTGTTTACGAGGTGATGGTGGCTTGCTTTGTGGTTCCCTTTCTGGTGTGGCTGGGATGGAAGCAGATGCACTGTTGCTTGCTGAGGCTACAAAGAAAATATTTGGTTCTTTGAGCAAAGAGAATGATGTGCTAACCATGGAAGATGATGAGTCCGATGCAAATGATCCTTCTGAAAAAAAATTGGGGAGTGATGGTATTCTTCCTGAATGGGCACAGAAGCTAGAACCTGTCAGAAAGTTGCCAACAAATGTCGGAACCCGAATCAGAAAGTGCGTCTATGATGCTCTGGAAATGAATCCTCCGGAGTGGGCGAGAGAAATACTTGAGCGTTCCATTAGCAAGGAAGTATACAAGGGCAATGCATCTGGACCAACGAAGAAAGCAGTTCTTCAACTGTTAAGTGATCTGTTTCGTGGAGGAGTGCAGCAGAACCCTAATGAAGGAAGGAAGAAAAAGATTGTTTTGTCAATTTCTGACATTATCATGAAACAATGCCGCATTGTATTACGCCGTGCTGCGGCTGCTGATGATTCAAAGGTTTTCTGCAATTTGCTGGGTAGAAAGTTAATCAATTCTTCTGATAATGATGATGAGGGGCTTCTTGGATCTCCAGCTATGGTGGCCCGTCCTCTTGACTTCCGCACTATCGACCTAAGGTTGGCTGCTGGAGCTTATGGGGGATCTCATGAAGCTTTTCTTGAGGATGTTCATGAGCTTTGGAACAATGTTCGTGTTGCTTTTGGGGATCAACCTGATTTAGTTGAACTGGCTGAAAAATTATCCCAGAATTTCAAATCATTGTATGATGAGGAGGTTGTCACCTATTTTGAAAAATTTGTGGAGTATTCGAAGGTGGGATGCTTGAATGCAGAAATGAGAAAAGAAGTTGAAGATTTTATTGCATCAACAAGTGAGATTCCTAAAGCTCCTTGGGATGAGGGAGTCTGTAAAGTATGTGGGATTGATAGGGATGATGATAGTGTCTTACTATGTGATACTTGTGATGCTGAGTATCATACATATTGTCTGAATCCTCCACTTGCAAGGATCCCTGAAGGAAACTGGTACTGCCCTTCTTGTGTCAATGGTAAGCATGCCACTCAAGATGTTACAAATCATGCACAGATTATTGGCAAGCGTCAAAGTAAGAAGTTCCAGGGAGAAGTTCATTCTCTTTACTTGGATGTGCTAACTCATTTATCTGCTGTAATGGAAGAAAAAGAATACTGGGAGTACAGTGTGGGCGAGAGAACTTCCCTTCTTAAGTTTTTGTGCGATGAGTTGCTTAACTCTTCCCTGATACGGCAGCACCTTGAGCAATGTGCAGATTTATCTGCTGAGTTACATCAGAAATTGCGTTCTCTCTCCACAGAATGGAAAAACCTGAAAACTAAAGAAGATATCTTATCCTCAAAGGCTGCAAAAGTTGTTACATGCATGCCAAATACCACTGGAGAAGTTGGTTTCAAGGAAGGGGTCACAGCTGCACTCTCAAGTACGGGTAAATGTCTGGTGCAGCCACATAATGTAATTGACAATCCTAATAATTTTGGGGTATCTGTTGATAGTTTGCAGTCAGAAGAGGTTACTAACGAGAAGCATAGGCTCAATGGTGTTGACAAAAGTGTATCTGTGATAAATTCAGATTCTGAAAACAAACACTTGAACTCCATAGATGTAGAAGGACAACTTAGGAATGTCTCTGCGGCTGTGGCATCCCAGTGTATGGATAAATCCACAAAATCTTTTCCATCACCAAGTCATATGCCTCATGAACAAAATGGTACTAGTGGAGCAGCTCATATCCAGGGTAATCACCAGAAATGTGACGTGAATGACATATCTACTGTTGATGAGTCAGAACCGTATCGCCTTGAGATCAATGCCATCAAGAGTGATATTTCACGATTAGAAGACTCCATAGCTGATGTCGGATCAAAGCTTCTGAAACTTTCCATTCGTCGGGAATTTTTGGGAATTGACTCCATTGGTCGCCTGTATTATGCGTCAGCTGTAGGCAGAGGTCGTTTAGTCGTTGATGCAAGTGCTGCAGTTCTGTATGGAAGACAAATGGCAGTTGGCAGAGATTCTGTTGACAAGTTTTCTTCCCTGCAGCATAATGTATTATCCGACAAGGATAACTATAAGATCATAGGGTTGCAGAAGGACTCCTCTTGTTTAATGTCTCCACCAAGTGATGGTTCAGGCATTAGTTCTTCATGGGTTGCTTATGAAACTGATGCAGAAATAGAAGAGCTTTTAAGTTGGCTGAAGGACAATGACCCTAAAGAAAAAGAACTGAAAGATTCTATTATGATGTGGCCAAAATCAAGAGCTCAAGAGTTTCATAATTCACCGAATGAAGGTCAGGTTGAGGAACAAGGGAATTTTCCTATACTAAGAAATAAGGAGAAAACAGCATCCAATTCTCTGGTTACAAAGGCGACATCTTTGCTGGAAAAGAATTATGGTCCATTCTTTGAGTGGGATGGCACTGAAGTGTTGAAGAAGCGAAGTAAAAATGCCAGAGTAAATAATGATGAAAAGTTGTATAGGTGTGAATGCCTAGAACCAATATGGCCATCTAGGAAGCACTGCATGTCTTGCCACAAAACTGTTTCAAGTGATGGTGAGCTGGTTGAACACATTGATGGGAAATGCAATGCAGGTCTTCCAGCCTTGGAGAAGAATAGGGATGATAATTTATCTTCTAAAGGAAGAGGGAACACAAAATGTGATTCCTCTCGGGAAATATTCAGAGGTGATGCAGATACAGCTGGAACTGCGGCTGCAACCAATGTTTCTTCTAAGCTTAGCTCAAGATTGATTAAATTTTCAAATGAAGAATCCTCTTGCCCATTTAACTTCGAAGATATATGTTCTAAGTTTGTGACAAATGATTCATGCAAGGAAGTTGTCAGAGAAATAGGTCTTATTGGTTCAAATGGGATTCCATCCTTTCTTCCTTCCATATCTCCCTTTGTTAGTGATTCTACACTCATGCTATTCTCAGCTCAAAACAATGATCGTATTGGTGGTGGAGAATCACTAACATCAGAATGTCAGGTTTCTCAGGGAAGCACTGATGGAGCTGGCAAATGCCGTGATAAAAAGTCTGGAATGTCTTTGGCTTCAAATGAAATTAGTAAAGCAGGGATTTCCAATAAAATATCTTTGGAACAAAGAGATGGAAATCTCTCTGAACGAAATCCTGCTTTGGATATAGGGGTAGATAGCTGCTGTGTGGTCCCATTGTCTTCTTTGAGACCATTAGTTGGCAGATCTTCACATATTTTGAGGCAACTGAAGATCAGTTTACTGGATATGGATGCTGCTCTCCCAAAGGTTGCTTTGAGACCATCAAAGGCACAGTCAGACAGAAGGCAGGCATGGCGGGCATTTGTTAAATCTGCAGAGACAATATATCAGATGGTTCAGGCGACAATTTCACTTGAGGATATGATTAAGACAGAGTACTTAAGAAATGACTGGTGGTATTGGTCATCATTCTCTGCTGCTGTCAAATCATCTACTTTGCCTTCCCTTGCCCTTCGGATATATTCTCTTGATTCAGCTATTATATATGAGAAAATGCCCAATTCAAGTGGTGACAGCTCGGAACCTTCTGCAACGGCAGAACAGAAGCCACCGGCCAATGCTGATGCAGATAAACTGAAAGCAAGCCGGAAGTCAAGTCGGAAAAGGAAGGAACCGGATGGTTGA 6561 0.4309 MIMELTDSGSAGDRTTAPQPQDSRSSGLEIDLNEIPYAAASPSSNHAETLPPPPDSAVDIVRAYHENPAPLPGAPASLPRGSAPCATCSKPPGAAGVVVCDGCERVFHIACAGFRGTRQAAILDEWLCSECVVGGVRSKRWPLGVKSKQLLDINASPPSDADGEGAGEELQDSRKHTLGDNSFGANPFGAPVTCSNYYNGNTFGFQKASGVVTHAVRVGFEDILNHTQSMTRCFEEALRDFISERRGVLEEGWRVEFRQSMNSSELYAVYCAPDGKIFDSVYEVACYLGLTSGYNSMESEVRNDRSLASLGGTHLSRKRKSTRNLSNGFAEKLGTLINSYCRDSPSDALTVECTGDHGHVHKASEIARKEDCHSGCLQSADRLPLRFGDFFVLSLGKVDDRPTYFDVHLVCPIGYKSCWHDKITGSLFTCEVLEGGDSGPIFRIKRCSCSEFPVPVGSTVLSMSNLCQFLNKNNGERKTDDSMDYDVHESIQMILSDPCVPTENDVINCIASFSNETCAGDSISQDSGLIDGIGEILVEERSSSAAWRVISQKVVNACNDICKQKGSLKFYCKHIEDEPCLHKWDTNSKKSDAHFSLLDKFCGSLCSVSVPDVTYADNDLKGLSEVLGNWLEQDRFGLDVEFVQEVLEQLPGVKESLKYELLSSRSNSSSLPTVENGFLVVEWRGGSQYQDENEAVQGSYKKPRKVGLTERSVREDRYPPPGKSLCSRVPSELIGDILQVWELLDRFDEILDLKEPLSLDELEKELINPWFDELDLNEKSERDIDAGQVLSSQGTDDDCRPTLSPSCDAGPSRYKESSHAFIQMETEAMKEAAQVKLASLTYARCFGVALTKAHNSLLRVLVGELQSKVAALVDPNFEPGEPKTRRGRRKDIDSAIPAKRTKLNMLPINELTWPELARRYILAVLSMDGNLDSAEITARESGKVFRCLRGDGGLLCGSLSGVAGMEADALLLAEATKKIFGSLSKENDVLTMEDDESDANDPSEKKLGSDGILPEWAQKLEPVRKLPTNVGTRIRKCVYDALEMNPPEWAREILERSISKEVYKGNASGPTKKAVLQLLSDLFRGGVQQNPNEGRKKKIVLSISDIIMKQCRIVLRRAAAADDSKVFCNLLGRKLINSSDNDDEGLLGSPAMVARPLDFRTIDLRLAAGAYGGSHEAFLEDVHELWNNVRVAFGDQPDLVELAEKLSQNFKSLYDEEVVTYFEKFVEYSKVGCLNAEMRKEVEDFIASTSEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCVNGKHATQDVTNHAQIIGKRQSKKFQGEVHSLYLDVLTHLSAVMEEKEYWEYSVGERTSLLKFLCDELLNSSLIRQHLEQCADLSAELHQKLRSLSTEWKNLKTKEDILSSKAAKVVTCMPNTTGEVGFKEGVTAALSSTGKCLVQPHNVIDNPNNFGVSVDSLQSEEVTNEKHRLNGVDKSVSVINSDSENKHLNSIDVEGQLRNVSAAVASQCMDKSTKSFPSPSHMPHEQNGTSGAAHIQGNHQKCDVNDISTVDESEPYRLEINAIKSDISRLEDSIADVGSKLLKLSIRREFLGIDSIGRLYYASAVGRGRLVVDASAAVLYGRQMAVGRDSVDKFSSLQHNVLSDKDNYKIIGLQKDSSCLMSPPSDGSGISSSWVAYETDAEIEELLSWLKDNDPKEKELKDSIMMWPKSRAQEFHNSPNEGQVEEQGNFPILRNKEKTASNSLVTKATSLLEKNYGPFFEWDGTEVLKKRSKNARVNNDEKLYRCECLEPIWPSRKHCMSCHKTVSSDGELVEHIDGKCNAGLPALEKNRDDNLSSKGRGNTKCDSSREIFRGDADTAGTAAATNVSSKLSSRLIKFSNEESSCPFNFEDICSKFVTNDSCKEVVREIGLIGSNGIPSFLPSISPFVSDSTLMLFSAQNNDRIGGGESLTSECQVSQGSTDGAGKCRDKKSGMSLASNEISKAGISNKISLEQRDGNLSERNPALDIGVDSCCVVPLSSLRPLVGRSSHILRQLKISLLDMDAALPKVALRPSKAQSDRRQAWRAFVKSAETIYQMVQATISLEDMIKTEYLRNDWWYWSSFSAAVKSSTLPSLALRIYSLDSAIIYEKMPNSSGDSSEPSATAEQKPPANADADKLKASRKSSRKRKEPDG 2186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02956 2186 PANTHER OS02G0192300 PROTEIN 24 2186 - -
Adu05g02956 2186 SUPERFAMILY FYVE/PHD zinc finger 51 132 IPR011011 -
Adu05g02956 2186 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1345 1385 IPR028942 -
Adu05g02956 2186 Gene3D - 383 492 - -
Adu05g02956 2186 ProSiteProfiles FYR domain FYRN motif profile. 382 435 IPR003888 GO:0005634
Adu05g02956 2186 Pfam Bromodomain 1150 1205 IPR001487 GO:0005515
Adu05g02956 2186 SUPERFAMILY Bromodomain 1097 1216 IPR036427 GO:0005515
Adu05g02956 2186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1261 1308 IPR013083 -
Adu05g02956 2186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 138 IPR013083 -
Adu05g02956 2186 MobiDBLite consensus disorder prediction 2165 2186 - -
Adu05g02956 2186 CDD Bromodomain 1097 1214 - -
Adu05g02956 2186 Pfam PHD-finger 85 132 IPR019787 -
Adu05g02956 2186 Pfam PHD-finger 1261 1308 IPR019787 -
Adu05g02956 2186 MobiDBLite consensus disorder prediction 1524 1549 - -
Adu05g02956 2186 MobiDBLite consensus disorder prediction 2144 2159 - -
Adu05g02956 2186 SUPERFAMILY DNA-binding domain 241 293 IPR016177 GO:0003677
Adu05g02956 2186 ProSiteProfiles Zinc finger PHD-type profile. 82 134 IPR019787 -
Adu05g02956 2186 ProSiteProfiles Bromodomain profile. 1152 1200 IPR001487 GO:0005515
Adu05g02956 2186 MobiDBLite consensus disorder prediction 9 28 - -
Adu05g02956 2186 ProSitePatterns Zinc finger PHD-type signature. 85 131 IPR019786 -
Adu05g02956 2186 CDD PHD_TCF19_like 84 131 - -
Adu05g02956 2186 SMART PHD_3 1261 1307 IPR001965 -
Adu05g02956 2186 SMART PHD_3 84 132 IPR001965 -
Adu05g02956 2186 MobiDBLite consensus disorder prediction 790 811 - -
Adu05g02956 2186 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 24 2186 - -
Adu05g02956 2186 Pfam Methyl-CpG binding domain 240 293 IPR001739 GO:0003677
Adu05g02956 2186 CDD PHD1_Lid2p_like 1261 1306 - -
Adu05g02956 2186 MobiDBLite consensus disorder prediction 153 176 - -
Adu05g02956 2186 ProSiteProfiles Zinc finger PHD-type profile. 1259 1309 IPR019787 -
Adu05g02956 2186 SUPERFAMILY FYVE/PHD zinc finger 1248 1311 IPR011011 -
Adu05g02956 2186 ProSitePatterns Zinc finger PHD-type signature. 1262 1306 IPR019786 -
Adu05g02956 2186 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 239 306 IPR001739 GO:0003677
Adu05g02956 2186 MobiDBLite consensus disorder prediction 2144 2186 - -
Adu05g02956 2186 Gene3D - 1104 1224 IPR036427 GO:0005515
Adu05g02956 2186 MobiDBLite consensus disorder prediction 1 34 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02956 3 2186 C2H2 Transcription Factor Family AT3G01460 45.515 0.0 1729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Adu05g02956 Bromodomain 8.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02956 K22768 - gmx:100820223 3048.07