Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02951 ATGGCTAACTTGGAAATAGAAGAGGAGCCAATGCTGTCACCTCCACAACGATCTCATGGACTCCAGGGTTCGGATTTTCGGGCCCGAAGCAGGTCTATGCACATTCCCATGGTCTCCCACCGAGAAGCAACTCGTACACTTGATAGTGTGAAAACCTTTCCCCAGAAGAAGAGTGCTTCATCGTCATTCTATTCCACTGCCACTCATGAAACTCTACATCTTTCTTCGTCCCGCCGCGGCGGTGGCCCACTTAGATGGCATCGTGCTATGACAGGAAGGCTTCAATATAATCCTCTTCAAGCAGAGTTTGATAGTATTTTTGAGGGTTCTGCTTGGAGAGTCCCTTCATTCTGCTCTTCATGTGTTCCTGGAGTTATACATCCTGACAGTGTAAAACAATGGAACAAGATTATAGCTATTTTAAGCTTGGTGGCAATATTTTTGGATCCATTATTTTTCTTCTTATTGTATGTTGAAAAGCATTTGAATTGCATTGTTATCAGTTGGACAATGACGAGACCACTTATTTTACTTAGAAGCATAAATGATTTAGTATATTTCATGAACATGCTTCTCCAGTTTAGGTTGGCTTATGTTTCTGCCGGGTCAAGGTTAAGGGGTACTGATTTAATTGATGATCCAAAGAAAATTGCTCGACATTACCTGACTAGTTATTTCTTTCTTGATTTGTTTATTGCACTTCCTCTACCACAGATAATAGTATTGTTTGTGCTGCCAAGATATTTCGGAGCGAGTCATGCTGAGAGTCTTTTATGTGGAGTGATCCTTGTGCAGTATATCCCCAGGTTATTCCGATTTTTGCCTCTGCTAATTGTCCAGTCTCCAGAAGGATTCATATTTGAGTCAGCATGGGCAAATTTTTTTATAAATATCCTCATTTTTATACTATCTGGACATGTCGTTGGCTCTTGTTGGTACCTCTTTGGTTTGCAGAGGGTTAATCAATGTTTGCGAGATGCCTGCCATAATTCAGTTGTTACTCAATGCATGAAGATTATTGATTGTGGGTATGACCGTTTCTCACACTATACATCATCAGATTCAGAAATGTGGAGAAACAATGCAAATGCAACTGCTTGTTTGAATTCCTCTTCTGGTGCTTTTGATTATGGGATATACGCCAATGTTGTACAACTTACTACGCATCCTAAAATAGTCAAGAAGTATCTGTATGCACTGTATTGGGGCTTCCAACAAATCAGTACCCTTGCTGGTAATCAAACCCCTAGTGATTTTGAGTTCGAAGTCCTTTTCATAATGGCAATCACAGGAATAGGACTCTTGCTTTTTGCACTTTTGATCGGAAACATACAAAACTATCTTCAAGCTCTCGGTCAGAGGACACTAGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGCCAGTTTCACTTACCAGAAGATCTTAGAAGGAAAATAAGACATGTTGAACGGTATAATTGGGCTGCAACAATAGGGGTGAATGCGGAAATGCTTATGGAGAATATGCCAGAAGATCTCCAAAGAGACATAAGGCGTCATCTCTTCAGATTCATTAAGAGAGTTCGAATTTTTTCTATGATGGACGAGCCTATTTTAGATGCCATTTGTGAGAAGTTAAGACACAAGATATACATCAAAGGAAGCAATATCTTGTATAATGGTGGTCTAGTGGAGAAGATGGTGTTTGTTATGCATGGGAAATTGGAGAGCATCGAAGGAGAAGATGGAATTAGAATTAGCTTAACCCAAGGGGATGCTTGTGGTGAAGAACTCTTGCAGTGGTGTTTGGAGAATTCATTACTCTACACAGCAAGCAGAAAACCAGAAAAAGTCTTGCGTAGTGAAAGGACAGTAAGGGCCTTAACAAATGTGGAGGTGTTTTCACTCCGAGCTGATGACCTTGAAGAAGTAATAATTCGTTTCTCAAGATTATTTCAAAGACCACGTGTTCAAGCAGCCCTAAGGTATGAATCACCTTATTGGAGATCCCTTGCTGCAACACGGATTCAGATGGCGTGGCGAAACAGGAAGAACCGTTTAAATCGTAAGCGTGCTGCCTCACAAACAAATTAG 2082 0.4073 MANLEIEEEPMLSPPQRSHGLQGSDFRARSRSMHIPMVSHREATRTLDSVKTFPQKKSASSSFYSTATHETLHLSSSRRGGGPLRWHRAMTGRLQYNPLQAEFDSIFEGSAWRVPSFCSSCVPGVIHPDSVKQWNKIIAILSLVAIFLDPLFFFLLYVEKHLNCIVISWTMTRPLILLRSINDLVYFMNMLLQFRLAYVSAGSRLRGTDLIDDPKKIARHYLTSYFFLDLFIALPLPQIIVLFVLPRYFGASHAESLLCGVILVQYIPRLFRFLPLLIVQSPEGFIFESAWANFFINILIFILSGHVVGSCWYLFGLQRVNQCLRDACHNSVVTQCMKIIDCGYDRFSHYTSSDSEMWRNNANATACLNSSSGAFDYGIYANVVQLTTHPKIVKKYLYALYWGFQQISTLAGNQTPSDFEFEVLFIMAITGIGLLLFALLIGNIQNYLQALGQRTLEMQLRGRDVEQWMSQFHLPEDLRRKIRHVERYNWAATIGVNAEMLMENMPEDLQRDIRRHLFRFIKRVRIFSMMDEPILDAICEKLRHKIYIKGSNILYNGGLVEKMVFVMHGKLESIEGEDGIRISLTQGDACGEELLQWCLENSLLYTASRKPEKVLRSERTVRALTNVEVFSLRADDLEEVIIRFSRLFQRPRVQAALRYESPYWRSLAATRIQMAWRNRKNRLNRKRAASQTN 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02951 693 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 100 688 - -
Adu05g02951 693 CDD CAP_ED 526 641 IPR000595 -
Adu05g02951 693 Gene3D - 133 451 - -
Adu05g02951 693 Gene3D Jelly Rolls 524 646 IPR014710 -
Adu05g02951 693 SUPERFAMILY cAMP-binding domain-like 453 650 IPR018490 -
Adu05g02951 693 ProSiteProfiles cAMP/cGMP binding motif profile. 526 650 IPR000595 -
Adu05g02951 693 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 100 688 - -
Adu05g02951 693 SUPERFAMILY Voltage-gated potassium channels 131 449 - -
Adu05g02951 693 SMART cnmp_10 526 659 IPR000595 -
Adu05g02951 693 Pfam Ion transport protein 134 455 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Adu05g02951 693 MobiDBLite consensus disorder prediction 1 27 - -
Adu05g02951 693 Gene3D Helix hairpin bin 455 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02951 Adu-Chr5 99205158 99213896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02951 99 602 Ion Channels AT3G17700 56.757 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02951 K05391 - gmx:100781973 752.666