Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02930 ATGAATGGAAAAGCCTCCGTCTCTAAGGAACTTAATGCCAAACACATCAAGGTTTTAGAGGGACTTCTTAGGCTACCTGACAACAGGGAATGTGCAGATTGCCGGAATAAGGCACCACGATGGGCAAGTGTGAACCTAGGAATTTTCATTTGCATGCAGTGTTCAGGAATTCACCGAAGTCTTGGAGTACACATATCACAGGTGCGGTCTACAACTTTGGATACATGGTTGCCAGAACAAGTATCTTTCATGCAACTTATGGGTAATGTGAATGCCAATAAGCACTGGGAGGCTGAGCTGCCGACAAATGTTGACAGAAATCGATATGGAATCGACAAATTTATTCGCGCCAAGTATGTGGATAAAAAATGGGCTTCAAAACATGGTCTACAAGCAGCATCTGCAAAGTCATCTGAAACATTGAGGAATCATCAAAGGAATAGAAGATTGTCTCTTGAGGAAAGCATTCTTGTGGGCCACATGGCACAAATTCAGCCGCCACAGCCGCAAGTAGCAAAATCTCATGAGATCCCCTCAGGTTTGGAAAGAAAGAAAAGTGCACCACAACAACTTCAACTCCTACAAGCTGGACAACATTTGATTGAGATTACATTATTTCGCCAATCCATTACCCTATTTCTCCCTGAATCGCTGGCACCCCACCTTCGAGTCCCACCTCCTGAACGCTCCCACCAGATCGGTGAATGGTTCCGATGTAACGGCGGTGGGAGTGAATTGAGCGCTTCTACTGGTAGTGGTGGTGGTGATGGGGGAGAGGGAGGAGGGGAAGTGGAAGAAGCCGGAGAAGAAGAGAAGAAAATGAAGAGGAGCATGATGGAGATGGTGATGGTGATGTTGATGGGTTTGGGTGGCACCAGCAGCATGGTGTTAATGTGGTTACATCTCTGCGTCGTCTCTGCCGTCGGGAAGTAG 933 0.4684 MNGKASVSKELNAKHIKVLEGLLRLPDNRECADCRNKAPRWASVNLGIFICMQCSGIHRSLGVHISQVRSTTLDTWLPEQVSFMQLMGNVNANKHWEAELPTNVDRNRYGIDKFIRAKYVDKKWASKHGLQAASAKSSETLRNHQRNRRLSLEESILVGHMAQIQPPQPQVAKSHEIPSGLERKKSAPQQLQLLQAGQHLIEITLFRQSITLFLPESLAPHLRVPPPERSHQIGEWFRCNGGGSELSASTGSGGGDGGEGGGEVEEAGEEEKKMKRSMMEMVMVMLMGLGGTSSMVLMWLHLCVVSAVGK 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02930 310 MobiDBLite consensus disorder prediction 244 273 - -
Adu05g02930 310 SUPERFAMILY ArfGap/RecO-like zinc finger 17 126 IPR037278 -
Adu05g02930 310 Gene3D Arf GTPase activating protein 2 132 IPR038508 -
Adu05g02930 310 MobiDBLite consensus disorder prediction 164 184 - -
Adu05g02930 310 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 132 IPR001164 GO:0005096
Adu05g02930 310 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD15-RELATED 1 189 - -
Adu05g02930 310 CDD ArfGap 19 119 - -
Adu05g02930 310 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Adu05g02930 310 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Adu05g02930 310 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Adu05g02930 310 Pfam Putative GTPase activating protein for Arf 18 127 IPR001164 GO:0005096
Adu05g02930 310 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 189 IPR044520 GO:0005096
Adu05g02930 310 SMART arf_gap_3 17 132 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02930 Adu-Chr5 98730724 98735888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02930 19 138 C2H2 Transcription Factor Family AT4G05330 46.825 1.12e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02930 K12486 - gmx:100802691 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g02930 05 98730724 98735888 Adu05g02930 05 98730724 98735888 ECH