Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02921 ATGGCTAACTTGGAAATAGAAGAGGAGCCAATGCTATCATCAAATGCACAATCATCCCATGAACTCAAGGATTCTAGTTTCCGGAGGATCCTATCAAGGAGACGAAGCGCATCCATGTACATTCCCATGGTGTCTATGGACCCATATTACAACAGAGAACCAAGTCTTGGAGAGCATAGTCGTCGTCAACTTAACAGCGTCAGAACCTTCCCGCCCAAGATTGATGAACTATATGCCACCCTTGGAACCCAAAATATTTTCAAACAGAGTGGAGTTACTGTGACTGAAAACAGTGAAAACAACTGGGACGACAACTATGATTGGGAACATACACCACCCGCAGTGAGCGTTGGGCAACAGGGAATCATTTGTAATAATTATTTTTGTATTAGGGTCGGTACTCATGATAATGCTCACCAAGGAATTCCAAGAACTCCGACTAGATTTGATCAAGAGTACAATTCGTCAATCTCAAGGATCAAAGGAGAACTTAACTCAGAGGGTTTTGTCAAAAAAGTGTTATCATTCATCTCTTCATGTATTCCTAAAGTTATAAGCCCACACTCAAAACGCGTCAAGCAATGGAATAAGATTATAGCTATCTTTTGCTTGGTGGCAATATTTCTTGATCCATTATTTTTTTTCATACCGTATGTACAAAAGGATTTCAATTGCATTGTTATCAACTGGATAAGGACAATACCACTTGTTGTACTTAGAAGCTTGAATGATTTAGTGTATTTCTTGAACATACTTCTTCAGTTTAGGTTGACTTATGTTTCTGCTATGATTCCTTTGCCTCAGATAATAATATTGTTTGTGCTACCAAAGTACTTATTGGGTTCATCAGGAGCAAATCATTCAAAGAATCTTATATCTGCAGTGATCCTTGTGCAATACATTCTCAGATTATTCAGGTTCTTGCCATTGCTAATTGGCCAATCTCCTTGGTATCTCTTTGGACTTCAGAGAGTTAATCAATGTTTGCTAGACGCTTGCCATAATGCTAACATCATTGGTTGCATGAAATATGTGGATTGTGGAAAAGGACATTCCTCTCACCAAACACAAGATTTGTGGACAAACAATGTAAATGCCACATCTTGTTTGAATTCGTTGTCTGGTTCTTTTGATTATGGGATCTATGCCGATGTTGTTCGACTTACTACAGGAAGCAACTTGATCAAAAAATATTTGTATGCACTTTTTTGGGACTTCCAGCAAATCAGTACTCTTGCTGGTAATCTAACCCCAAGTGATTTTGAGTTGGAAAGTCTCGGACAAAGAACACTAGAAATGCAACTTAGAAGCCGTGAAGTTGAGCAATGGATGAACCAGTTTCACTTATCAGAAGATCTAAGAAAGAGGATCAGACATGCCGAAAGAATATGCCAGAAAGATCTGCAGAGAGACATAAGACGTCATCTCTTCGAATTTATTAAGAAAATTCGAATTTTCAGCTTAATGGATGAGCCTATTTTAGATGCCATTTGTGAGAGGCTTAGGCAAAAAGTATACTTCAAAGGAAGTACTATTTTGCATCCTGGTGATTTGGTAGAGAAAATGTTCTTTGTTTTGCGTGGGGAATTGAAGAGCATTGGCGAAGATGGAACTAGAGTTTTTTTAACCGAAAGGGATGCTTGTGGTGAAGAACTTTTAGTATGGTGTCTTGAAAATTCTTCGGTTAGCACAGgtagttcggcacatcgtcccatcctcgctggtttctctgtccgtggcttggagcagctcgccatcgggtcaccgcttgccgtcgtctctgctctcgtcgtcgtgtcgccggttgccgccgtgtctctgtcgaagATCTCTGTAGTGAAGCTAGTGGATCCTGAAGTGAAGGAACGCAACAATGAGGAAGAAGGAGGTGAAGAGTTGTCTGATATATACCACTCACCGCAGTTTTCCAAGCTGAACTACGCGGAGATGATGGAGAAGTTCAAGGTTTGTATATATGCTGATGGAGATCCCAAGACATTTTATCAAACACCTAGGAAGCTCACTGGGAAATACGCCAGTGAGGGATATTTCTTCCAAAACATTCGGGAGAGCAGGTTCTGA 2082 0.367 MANLEIEEEPMLSSNAQSSHELKDSSFRRILSRRRSASMYIPMVSMDPYYNREPSLGEHSRRQLNSVRTFPPKIDELYATLGTQNIFKQSGVTVTENSENNWDDNYDWEHTPPAVSVGQQGIICNNYFCIRVGTHDNAHQGIPRTPTRFDQEYNSSISRIKGELNSEGFVKKVLSFISSCIPKVISPHSKRVKQWNKIIAIFCLVAIFLDPLFFFIPYVQKDFNCIVINWIRTIPLVVLRSLNDLVYFLNILLQFRLTYVSAMIPLPQIIILFVLPKYLLGSSGANHSKNLISAVILVQYILRLFRFLPLLIGQSPWYLFGLQRVNQCLLDACHNANIIGCMKYVDCGKGHSSHQTQDLWTNNVNATSCLNSLSGSFDYGIYADVVRLTTGSNLIKKYLYALFWDFQQISTLAGNLTPSDFELESLGQRTLEMQLRSREVEQWMNQFHLSEDLRKRIRHAERICQKDLQRDIRRHLFEFIKKIRIFSLMDEPILDAICERLRQKVYFKGSTILHPGDLVEKMFFVLRGELKSIGEDGTRVFLTERDACGEELLVWCLENSSVSTGSSAHRPILAGFSVRGLEQLAIGSPLAVVSALVVVSPVAAVSLSKISVVKLVDPEVKERNNEEEGGEELSDIYHSPQFSKLNYAEMMEKFKVCIYADGDPKTFYQTPRKLTGKYASEGYFFQNIRESRF 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02921 693 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 315 425 - -
Adu05g02921 693 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 423 571 - -
Adu05g02921 693 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 8 262 - -
Adu05g02921 693 SUPERFAMILY cAMP-binding domain-like 428 553 IPR018490 -
Adu05g02921 693 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 262 316 - -
Adu05g02921 693 SMART cnmp_10 485 611 IPR000595 -
Adu05g02921 693 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 315 425 - -
Adu05g02921 693 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 8 262 - -
Adu05g02921 693 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 262 316 - -
Adu05g02921 693 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 423 571 - -
Adu05g02921 693 CDD CAP_ED 485 554 IPR000595 -
Adu05g02921 693 ProSiteProfiles cAMP/cGMP binding motif profile. 485 564 IPR000595 -
Adu05g02921 693 MobiDBLite consensus disorder prediction 1 27 - -
Adu05g02921 693 Gene3D Jelly Rolls 459 621 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02921 Adu-Chr5 98611466 98618688 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02921 5 566 Ion Channels AT3G17700 37.719 9.54e-138 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02921 K05391 - gmx:100794895 546.584