Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02912 ATGGCTAATATTGCTAACAGCATCGTCTTTGGGGGTGTTGTTGGGGTTGCAGCACAACTTCCTCAATCTCCGTTTCCATCATTACCCGTTTCAAATTCTCCCATTTTCACCCAAAAACGCAAACTTTATCTTAATTGCTCCAAAACCAACCGCATAACAATCCCTTTCCCTTCTTCTTCTTCTTCTTCTTCATCACCGTTCAGCAGCAAGTGTTGTTGCTATGTGTTGGCGTGTCTCCCTCAACCACATGCTTCTGATTCATCATCATCATCAACTTCTTCTAATTCCAATAGCAAACCAAGTTCTTCTTCTGCTGCTCCTCCTTCAACTAAGCTCTATGTTAGTGGGTTATCTTTTCGAACCACTGAAGAAAGCTTGCGAAATGCATTTATGAATTTTGGTCAAGTTTTAGAAGTGAATTTGGTGATGGATAAAATTGCAAATAGACCAAGAGGGTTTGCATTTCTTAGATATGCAACTGAACAGGAATCTCTGAAGGCTATTGAGGGAATGCATGGAAAGTTCTTGGATGGTAGGGTCATATTTGTGGAAGTTGCCAAACCAAGATCAGAACTAAGGCAAAGACAAAACACTAGATACTAG 603 0.4046 MANIANSIVFGGVVGVAAQLPQSPFPSLPVSNSPIFTQKRKLYLNCSKTNRITIPFPSSSSSSSSPFSSKCCCYVLACLPQPHASDSSSSSTSSNSNSKPSSSSAAPPSTKLYVSGLSFRTTEESLRNAFMNFGQVLEVNLVMDKIANRPRGFAFLRYATEQESLKAIEGMHGKFLDGRVIFVEVAKPRSELRQRQNTRY 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02912 200 Gene3D - 80 200 IPR012677 -
Adu05g02912 200 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 110 188 IPR000504 GO:0003723
Adu05g02912 200 PANTHER ORGANELLE RRM DOMAIN-CONTAINING PROTEIN 6, CHLOROPLASTIC 44 198 - -
Adu05g02912 200 SMART rrm1_1 111 184 IPR000504 GO:0003723
Adu05g02912 200 PANTHER NUCLEOLAR PROTEIN 8 44 198 - -
Adu05g02912 200 MobiDBLite consensus disorder prediction 86 109 - -
Adu05g02912 200 SUPERFAMILY RNA-binding domain, RBD 99 198 IPR035979 GO:0003676
Adu05g02912 200 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 112 181 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02912 Adu-Chr5 98261639 98264734 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02912 110 200 Eukaryotic Initiation Factors Gene Family AT4G34110 28.571 1.22e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02912 - K13195 ahf:112802436 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g02912 05 98261639 98264734 Adu05g02912 05 98261639 98264734 ECH