Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02911 ATGGAGATGCAGGACCAAATCGAAGGCACAAAGCTAAGCAAGTCTGGTACAGCCAGTGACTGCCATTCCAATGATGGATCACAATCCCAATCGCCAGATATAAGTTCTGTTGTGAACAATCATGCCCCCAAGGTGAGGAAACCATATACCATCACTAAGCAAAGGGAGAAGTGGACTGAGGAAGAGCATGAAAAGTTCCTTGAAGCTTTGAAGTTGTATGGTCGGGGATGGCGTCAAATTGAAGAGCATATAGGCACCAAAACTGCTGTTCAGATTCGAAGCCATGCACAAAAGTTTTTCTCTAAGGTTGTGCGGGACTCGGACGGAAGTGCTGAAAGTTCTATACATCCAATTGACATACCTCCTCCTCGTCCTAAAAGGAAACCCCTTCATCCATATCCCCGTAAATTGGCCAACTCCTTCAAAAGGCACTCCATACCAAATGAACCAGAAAAATCTCCATCGCCTAATCTGTCCTCTGCGGAGAAAGACTCTCAATCTCCAACCTCTGTGCTATCTGCCTTTGGTTCGGAAGCATTTGGGTCAGCATTTTCAGAGCAGACCAACAGATGCCTTTCTCCGAATTCTTGCACTACTGACATTCAATCAATCAACTTGTCACCTATTGAGAAGGAAAATGATTGCATGACATCTAAACCATCCAAGGAGGAAGACAAAACGCCTCTAGCTTCTGCCCCTTTATCCATCAGCTCACAACCTTACTTGCACATGAAGTCTGAGAAGTTGGAGTTGTGTTCCAAGCAAACCAAGTGTATCAACAATGATGTTGTCAATGTCCTGCCCACTACTATAAAGCTGTTTGGAAGAACTGTTTCAATGGTCGGTAATCAGGAGTCAATTAATACTGAAGAGGAGTGTGTTAAGCTATGTATTACTAGGTCTGATGAAGTAGATGATGTTGAGAATCAATTGAATACACAGTTATCACTAGGCATGTGTAATGGAAGTTGGCAAGTAATGCCTAAAGAAGCTATAGTGAAGGAGGACCTTGGCCTTGGAGAATCTGCACCTGAAGCATCTTTGTCATGGTCAAGTTGGTTCCCAGGCGGTCCGGCTGCTTACTTTGGTTCATCCAATACAGTCGTAAATCCTATGCCTCTTCACCCCTCCTTGAAAGTAAGAACTAGAGAGGAGGAAGGTTCTTGTACTGGTTCCAATGGTGAATCAGTCAATGATGTGGAAATTCAGGGCAAGATTCAGGGAAGGTTCTTGGACACCGTCGATTCCAGGTGTCAACAAACATCTCATCAAGAGGAAGTAGTAGTCCCCCAGAAGTCTCCAAGGGGTTTTGTACCATACAAAAGATGTTTAGCTGAAAGAGATGCAAGTTCTTTGATTGTTGCATTGGAAGAAAGGAAGGGGCAAAGAGCTAGGGTGTGCTCATAG 1407 0.4421 MEMQDQIEGTKLSKSGTASDCHSNDGSQSQSPDISSVVNNHAPKVRKPYTITKQREKWTEEEHEKFLEALKLYGRGWRQIEEHIGTKTAVQIRSHAQKFFSKVVRDSDGSAESSIHPIDIPPPRPKRKPLHPYPRKLANSFKRHSIPNEPEKSPSPNLSSAEKDSQSPTSVLSAFGSEAFGSAFSEQTNRCLSPNSCTTDIQSINLSPIEKENDCMTSKPSKEEDKTPLASAPLSISSQPYLHMKSEKLELCSKQTKCINNDVVNVLPTTIKLFGRTVSMVGNQESINTEEECVKLCITRSDEVDDVENQLNTQLSLGMCNGSWQVMPKEAIVKEDLGLGESAPEASLSWSSWFPGGPAAYFGSSNTVVNPMPLHPSLKVRTREEEGSCTGSNGESVNDVEIQGKIQGRFLDTVDSRCQQTSHQEEVVVPQKSPRGFVPYKRCLAERDASSLIVALEERKGQRARVCS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02911 468 Gene3D - 57 104 - -
Adu05g02911 468 CDD SANT 57 100 IPR001005 -
Adu05g02911 468 Pfam Myb-like DNA-binding domain 55 98 IPR001005 -
Adu05g02911 468 ProSiteProfiles SANT domain profile. 53 104 IPR017884 -
Adu05g02911 468 MobiDBLite consensus disorder prediction 150 170 - -
Adu05g02911 468 PANTHER SWI/SNF COMPLEX-RELATED 3 456 - -
Adu05g02911 468 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 53 102 IPR006447 GO:0003677
Adu05g02911 468 PANTHER PROTEIN REVEILLE 7-RELATED 3 456 - -
Adu05g02911 468 SUPERFAMILY Homeodomain-like 49 102 IPR009057 -
Adu05g02911 468 MobiDBLite consensus disorder prediction 208 235 - -
Adu05g02911 468 MobiDBLite consensus disorder prediction 1 58 - -
Adu05g02911 468 ProSiteProfiles Myb-like domain profile. 50 100 IPR001005 -
Adu05g02911 468 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 50 104 IPR017930 -
Adu05g02911 468 MobiDBLite consensus disorder prediction 105 170 - -
Adu05g02911 468 MobiDBLite consensus disorder prediction 8 38 - -
Adu05g02911 468 SMART sant 54 102 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02911 Adu-Chr5 98257176 98261340 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu05g02911 Myb_DNA-binding 1.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02911 - - gmx:778089 539.265