Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02909 ATGGAGTATGGTAGCGGAGGGAGTGGTGGGTCCCCAGGGGAGCACCACCATCACCACCACAATCACAACGACGCTTCTTCTTCCGAGCGGAGGAAAAAGCGCTACCACCGTCACAGTGCGAATCAGATTGAAAGGCTTGAAAGGGTGTTCAAGGAGTGTAATCACCCAGACGAGAAGCAGAGATTGCAGTTAAGCAGAGAATTAGGCTTGGCTCCAAGGCAGATCAAATTTTGGTTCCAGAACAGAAGGACCCAGATGAAGGCGCATGGAGAGAGAGCAGATAACTGTGCACTGAGGGCAGAGAATGATAAGATACGTTGCGAGAACATAGTCATAAGGGAGGCCCTCAAGAACGTTATCTGCCCCTCTTGTGGTGGTGGCCCCTCCCTCAACGACGATTCCTATTTCGATGAACAAAAATTGAGACTTGAGAATGCCCAACTAAAAGAAGAGCTTGATAGAGTGTCTAGCATTGCGGCTAAGTACATTGGAAGGCCAATTTCACAGCTCCCACCAGTTCAGCCAATTCATATATCCTCCCTTGATTTGACCATGTCGAGTTTTGGGGGCCACGCCGGGTTCGGCGGCGGCCCCTCCCTCGACCTTGACCTCCTTCCGGGGAGTTCCTCGGCTATGCCGCCGCATGTGCCTTACCAGCCGGCTTGTCTCTCGGACATGGACAAGTCTCTAATGTCAGGCATTGCCTCTAACGCCATGGAGGAATTGCTGAGCCTCTTGCAGACCAATGAGCCGTTGTGGATGAAATCAAGTGATGGGAGAGATGTTCTTAATTTTGATGCATATGATAGGATGTTTCCAAAGGCTAATAGTCACTTGAAGAACCCCAATGTTAGGATAGAAGCTTCTAGAGACTCTGGTGTTGTTATCATGAATGGCCTAACCTTGGTTGACATGTTCATGGATCCAAGCAAGTGGATGGAGCTGTTTCCCACAATTGTAACGGCTGCAAGAACAATTGAAGTTATATCTTCTGGGATGATGGGGGGTCATAGTGGTTCTTTGCAATTGATGTATGAAGAGTTGCAAGTGCTGTCTCCACTTGTTTCAACAAGAGAATTCTACTTCCTCCGTTATTGTCAGCAAATTGAGCAAGGTCTATGGGCAATAGTAGATGTTTCCTATGATTTTCCACAGGACAATCACTTTGCTCCGCCGTTCCGATCTCATCGCCTTCCTACCGGTTGCTTCATTCAGGACATGCCTAATGGATACTCCAAGGTTACATGGGTTGAACATGTAGAGATCGAAGACAAAACTCCGGTTCATCGTCTTTTCCGGAATCTTGTTTATAATGGAATGGCATTTGGAGCTCAGAGATGGCTTGCTGTGTTGCAGAGGATGTGTGAAAGATTGGCTTGTTTAATGGTAACAGGAAATTCCACCAGGGACCTTGGAGGAGGTAAGCTAGCACAAAGAATGGTAACCAATTTTTGCGCGAGCATTGGCACGTCGGCCGGCCACAGGTGGACCACACTGTCCGGGATGAATGAGATTGGTGTCAAGGTCACTGTCCACAAGAGCACAGACCCCGGTCAACCTAGCGGCGTGGTGCTGAGCGCCGCCACCACCATTTGGCTCCCTCTCCCTCCACAAACCGTCTTCAATTTCTTCAAGGACGAAAGAAAAAGACCACAGTGGGATGTTCTTTCTAATGGCAATGTACAAGAAGTTGCTCATATAGCAAATGGTTCACACCCTGGTAACTGTATATCTGTGCTTCGGGCATACAACACAAGCCAGAATAACACACTGATACTACAAGAGAGTTGCATAGATCCATCAGGCTCCATAGTAGTATACTGTCCGGTTGAGCTTCCATCGATCAACATAGCAATGAGCGGCGAGGACCCGTCGTATATCCCCCTGGTACCGTCAGGTTTCACGATCACCCCCGACGGAAACCACCACGATCATCAAGGAGGTGGTGACGGGGCATCCACAAGCTCAACCCCAAGCAGAAGCAGCAGCACCATGGTGGGAATGAGATCCGGCGGGTCACTGGTGACGGTTGCATTCCAAATACTAGTGAGTAGCTTGCCATCTGCAAAGCTCAACATGGAGTCTGTAGCAACTGTTAATAACCTCATCAGCACCACTGTTCAGCAAATTAAAGCTGCTTTGAATTGTCCTACTTCCTGA 2160 0.4875 MEYGSGGSGGSPGEHHHHHHNHNDASSSERRKKRYHRHSANQIERLERVFKECNHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMKAHGERADNCALRAENDKIRCENIVIREALKNVICPSCGGGPSLNDDSYFDEQKLRLENAQLKEELDRVSSIAAKYIGRPISQLPPVQPIHISSLDLTMSSFGGHAGFGGGPSLDLDLLPGSSSAMPPHVPYQPACLSDMDKSLMSGIASNAMEELLSLLQTNEPLWMKSSDGRDVLNFDAYDRMFPKANSHLKNPNVRIEASRDSGVVIMNGLTLVDMFMDPSKWMELFPTIVTAARTIEVISSGMMGGHSGSLQLMYEELQVLSPLVSTREFYFLRYCQQIEQGLWAIVDVSYDFPQDNHFAPPFRSHRLPTGCFIQDMPNGYSKVTWVEHVEIEDKTPVHRLFRNLVYNGMAFGAQRWLAVLQRMCERLACLMVTGNSTRDLGGGKLAQRMVTNFCASIGTSAGHRWTTLSGMNEIGVKVTVHKSTDPGQPSGVVLSAATTIWLPLPPQTVFNFFKDERKRPQWDVLSNGNVQEVAHIANGSHPGNCISVLRAYNTSQNNTLILQESCIDPSGSIVVYCPVELPSINIAMSGEDPSYIPLVPSGFTITPDGNHHDHQGGGDGASTSSTPSRSSSTMVGMRSGGSLVTVAFQILVSSLPSAKLNMESVATVNNLISTTVQQIKAALNCPTS 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02909 719 ProSiteProfiles START domain profile. 224 460 IPR002913 GO:0008289
Adu05g02909 719 SUPERFAMILY Bet v1-like 225 458 - -
Adu05g02909 719 CDD homeodomain 31 87 IPR001356 GO:0003677
Adu05g02909 719 SUPERFAMILY Bet v1-like 475 711 - -
Adu05g02909 719 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 13 717 IPR042160 -
Adu05g02909 719 Coils Coil 138 158 - -
Adu05g02909 719 ProSiteProfiles 'Homeobox' domain profile. 29 89 IPR001356 GO:0003677
Adu05g02909 719 MobiDBLite consensus disorder prediction 1 38 - -
Adu05g02909 719 SUPERFAMILY Homeodomain-like 12 88 IPR009057 -
Adu05g02909 719 SMART HOX_1 30 93 IPR001356 GO:0003677
Adu05g02909 719 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 13 717 - -
Adu05g02909 719 Gene3D - 232 457 IPR023393 -
Adu05g02909 719 ProSitePatterns 'Homeobox' domain signature. 64 87 IPR017970 GO:0000981|GO:0006355
Adu05g02909 719 Gene3D - 15 102 - -
Adu05g02909 719 MobiDBLite consensus disorder prediction 637 668 - -
Adu05g02909 719 MobiDBLite consensus disorder prediction 648 668 - -
Adu05g02909 719 Pfam START domain 235 457 IPR002913 GO:0008289
Adu05g02909 719 MobiDBLite consensus disorder prediction 12 30 - -
Adu05g02909 719 Pfam Homeodomain 32 87 IPR001356 GO:0003677
Adu05g02909 719 CDD START_ArGLABRA2_like 228 456 - -
Adu05g02909 719 SMART START_1 233 457 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02909 Adu-Chr5 98140116 98143270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02909 28 719 Homeobox Transcription Factor Family AT1G73360 62.994 0.0 896
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Adu05g02909 START 1.2e-48 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02909 K09338 - gmx:100809075 1151.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g02909 05 98140116 98143270 Adu05g02909 05 98140116 98143270 ECH