Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02897 ATGGCCAGAGTCACCATTCACGTGGAGCAATCTGAGACTGAAGGAGGAGAAGAAGCACCACCCCCATTAAGAATAGAAGTTGGGAACAAATATCTGGCAGCATCTGACTCGCTAGGATTATGTGATAAACCCTTTTGCAATACATGTCCCAACTATTTGAAGACTCCGAAACATGATTTAACTGATAACGCGAACAATTCTACCACATTCTCCTTCTGGACATTCTCCTTCTGGCTTTCACTTGCTCTGAATCCTCACAGCAAATGGGATCATAAATGTGTTGGAGTCCTGTGGTTGGTCGCACAAAGAACATATATTCCCATCATATTCGTCATTGATCTTGTCCTTGGAACGAACATTATTTGGCGGTTTAGGATGGCTTATATTTCTTCTAAGCCAACAGGTGGTGGTGGATATTTAGTTGACGATCCAACAAAAATTGCTCTCCGTTACATACTAGCACCAAATGGGTTTGCTGTTGATTTCTTTCTCATGTTTCCTTTTTCTCTGAAGGTTGAGAAATGTTTGCTAGCTACCTGCAATGCGTCTGGCATAATTGGATGTAAGAGTATCATCGTTTGTGACTCTAAGGCAAACAATGATGCAACTGAGTGGTTGATAAATAAAAATGCCAGCATCTGTTTCTCTAATACTTCTAGCAATGGGATCTTTGGTGATATAATACCACTTGTGGGATATCACTCATTTCGCAAATATATATTTACACTGTTTTGGGGTATCACGCAAATTAGTAACATTTCTGGTAAAACTCCAAGCATCTCTAATGTGGAAGAAGTCTTCTTCGTATGGGCTATCAGAGCATTGGCGATCTCAATTTTTGCACTTATATTTGGAAACATAACAAGTATTATTCAAGGTCTCAGTAGGAGGAAGATAGATACCATACTTAGACTCAATGAAATTGAACGATGGTCAAGGCATCGTCACCTACCAGAAGATTTAAGCAGGAGAATACTAGATGCTGAAATTCAGAATTGGGCTGCAACAAAAGGGATGAAGGAAGAAGAACTTTTGAAGAGTATGCCAAAGGATATCCAGAGAGACCTAACAAGGCATCAGTTTCTCCCCATTATTAAAAAGGTTCAACTCTTTGAAATCATGCACCAGTCAATTCTTGATGCTATCTGTATGGAATCAAAGTGGAAGCTGTACTTGGCAGACAGTACAATCATGTATCCAGGTGACTTAATAGAGATGATAGTCTTTATTGTGCATGGAAAACTGGAGATCAAGGACAGCAGTGGAACAAGCGTCCACATATCTGACGGGGATGCATGTTGCCAAGAACTCCTTTTCTGGTGTCTTCAGAGAGCTTCATCCAATAGTAGCACAGATGGTGACAAATTATTTTTTCCTGAAGAAAGATTTCTGAGCACCAAGAGTATAACTTGTTTAACAGATGTGGAGGCATTTGTGGTTGAAGTTACTGACCTTGAAAAGATCCTAACTCGGTTTGCAAAATTGTTGCACACTCCACGTATTGAAGAGGCCATAAAAAGGCACGAAATGCTTGAAAGGCTGCATGAAGAGTCAGGAAGCAACCAAGAAGAACCACAGAGTGCTACTGTCCCAGAGGAATTACCCTATATATGTTTACATCATTAA 1626 0.401 MARVTIHVEQSETEGGEEAPPPLRIEVGNKYLAASDSLGLCDKPFCNTCPNYLKTPKHDLTDNANNSTTFSFWTFSFWLSLALNPHSKWDHKCVGVLWLVAQRTYIPIIFVIDLVLGTNIIWRFRMAYISSKPTGGGGYLVDDPTKIALRYILAPNGFAVDFFLMFPFSLKVEKCLLATCNASGIIGCKSIIVCDSKANNDATEWLINKNASICFSNTSSNGIFGDIIPLVGYHSFRKYIFTLFWGITQISNISGKTPSISNVEEVFFVWAIRALAISIFALIFGNITSIIQGLSRRKIDTILRLNEIERWSRHRHLPEDLSRRILDAEIQNWAATKGMKEEELLKSMPKDIQRDLTRHQFLPIIKKVQLFEIMHQSILDAICMESKWKLYLADSTIMYPGDLIEMIVFIVHGKLEIKDSSGTSVHISDGDACCQELLFWCLQRASSNSSTDGDKLFFPEERFLSTKSITCLTDVEAFVVEVTDLEKILTRFAKLLHTPRIEEAIKRHEMLERLHEESGSNQEEPQSATVPEELPYICLHH 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02897 541 Gene3D Jelly Rolls 368 494 IPR014710 -
Adu05g02897 541 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 20, CHLOROPLASTIC-RELATED 171 508 - -
Adu05g02897 541 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 20, CHLOROPLASTIC-RELATED 90 168 - -
Adu05g02897 541 CDD CAP_ED 370 497 IPR000595 -
Adu05g02897 541 SUPERFAMILY cAMP-binding domain-like 301 495 IPR018490 -
Adu05g02897 541 MobiDBLite consensus disorder prediction 1 21 - -
Adu05g02897 541 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 171 508 - -
Adu05g02897 541 Gene3D Helix hairpin bin 303 359 - -
Adu05g02897 541 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 90 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02897 Adu-Chr5 97745477 97751368 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02897 171 451 Ion Channels AT3G17700 37.544 1.24e-54 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02897 K05391 - qsu:112012074 276.174