Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02889 ATGGTGATCACCTCCGCTGTCACAGATCCTGAAGAACAAACACAAAGCTTGCACTCTACTTTTGCTTCCAGATATGTTCGTGACCCTATTCCCAGGTTCAAGATGCCAGAGAAGTGTATACCAAAGGATGCAGCATATCAGATCATAAACGATGAGTTGATGTTGGATGGAACACCAAGGCTTAACTTGGCATCTTTTGTGACCACTTGGATGGAGCCTGAGTGTGATAAGCTCATCATGGCTTCGCTTAACAAGAACTATGTTGACATGGATGAGTATCCTGTCACCACTGAGCTCCAGAATAGGTGCGTTAATATGATAGCACACCTATACCATGCTCCTATCGGTGATGATGAGGCTGCAGTCGGTGTCGGAACTGTCGGATCATCAGAGGCAATAATGTTGGCAGGTCTAGCTTTTAAAAGGAAATGGCAGGCAAAGAGAAAAGCAGAAGGCAAACCTTATGATAAGCCTAACATAGTTACCGGCGCTAATGTGCAGGTTTGTTGGGAGAAGTTTGCACGGTATTTCGAGGTTGAGCTTAAGGAAGTGAAACTCACAGAAGGATACTATGTGATGGACCCTGTGAAAGCAGTTGAAATGGTTGATGAGAACACCATCTGTGTGGCGGCGATTTTGGGGTCGACTCTGACCGGTGAGTTTGAGGATGTGAAACTTCTTAATGAGCTTCTTACTAAAAAGAATAAGGAGACAGGATGGAATACCCCGATTCATGTTGATGCTGCCAGCGGAGGGTTCATTGCCCCATTTCTCTACCCTTGTCTTGAGTGGGATTTTCGCTTACCATTAGTGAAGAGCATCAATGTTAGTGGTCATAAGTATGGTCTTGTCTATCCCGGTGTCGGTTGGGTTGTTTGGAGGAGTAAAGATGACTTGCCAGAGGAACTTGTTTTTCACATAAACTATCTCGGATCGGATCAGCCAACATTTACCCTCAATTTCTCCAAAGGCTCTAGTCAAATTATTGCTCAATATTACCAATTTATACGGCTTGGCACAGAGGGCTACAAAAATATCATGGAGAACTGCAGGGAGAATGCAAGAATTCTGAGGGAGGGAATCGAGAGAACAGGCCGGTTCAACATCATCTCCAAGGATGTTGGCGTGCCGCTTGTTGCCTTCTCTTTGAAAGACAGCAGCCAACACACAGTGTTTGAGGTGTCAGACCATCTGAGAAAATTTGGCTGGATAGTTCCGGCCTACACAATGCCGCCAGACGCGCAGCACATTGCAGTCCTCCGGGTGGTGATCAGGGAGGATTTCAGCCGGGGATTGGCGGAGAGACTCGTGTCCGACATAGTGAAAGTTGTGGATCTCTTGGACACACTTCCAAGCCCTCTATCAACAAAAAAGGCACATGTGGTAGCTGTTGCTAATAATGAGACAAGTGAGAAGGCTAAGAAGAGTGCATTAGAGACTCAGAAAGAGATTGCCTTGTATTGGAAGAGGCTTGTGGATGGTAAAAGAGTTGGAGCATGTTAG 1503 0.4584 MVITSAVTDPEEQTQSLHSTFASRYVRDPIPRFKMPEKCIPKDAAYQIINDELMLDGTPRLNLASFVTTWMEPECDKLIMASLNKNYVDMDEYPVTTELQNRCVNMIAHLYHAPIGDDEAAVGVGTVGSSEAIMLAGLAFKRKWQAKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLTEGYYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNELLTKKNKETGWNTPIHVDAASGGFIAPFLYPCLEWDFRLPLVKSINVSGHKYGLVYPGVGWVVWRSKDDLPEELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGTEGYKNIMENCRENARILREGIERTGRFNIISKDVGVPLVAFSLKDSSQHTVFEVSDHLRKFGWIVPAYTMPPDAQHIAVLRVVIREDFSRGLAERLVSDIVKVVDLLDTLPSPLSTKKAHVVAVANNETSEKAKKSALETQKEIALYWKRLVDGKRVGAC 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02889 500 Gene3D - 69 363 IPR015421 GO:0003824
Adu05g02889 500 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 19 447 IPR010107 GO:0004351|GO:0006536|GO:0030170
Adu05g02889 500 SUPERFAMILY PLP-dependent transferases 14 446 IPR015424 -
Adu05g02889 500 Pfam Pyridoxal-dependent decarboxylase conserved domain 36 384 IPR002129 GO:0016830|GO:0019752|GO:0030170
Adu05g02889 500 Gene3D - 1 68 - -
Adu05g02889 500 PANTHER GLUTAMATE DECARBOXYLASE 3 500 - -
Adu05g02889 500 Gene3D - 364 451 - -
Adu05g02889 500 PANTHER GLUTAMATE DECARBOXYLASE 3 500 IPR010107 GO:0004351|GO:0006536|GO:0030170
Adu05g02889 500 CDD DOPA_deC_like 62 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02889 Adu-Chr5 97589089 97592646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02889 12 500 Calmodulin-binding Proteins AT3G17760 79.550 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02889 K01580 - gmx:100783047 912.138