Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02881 ATGTCAGACCCAAATTCAGTTGATGTGATTTTGGAATTTCTGAGGAGGAACCGGTTCACCCGGGCTGAGGCAGCCTTGCGTAGTGAACTCGGCAACCGTTCTGATGTGAATGGGTTCCTTCAGAAGCTTAAATTAGAGGAAAAGGAATTGTGTAATGTGTCACATGATGATAAGGGGACGACAGTGCTAGAAAGCCGTGGCTCGGATTCTCGTGATAGTGTTGATGGTTCTAAAGAGCTGATTGTGAAGGAAATAGAGTATGGAACTAGTAGAAATAATGTTGAAAGCAAAAGGAAAGCTGCTGCTTCTACAGGGGAGCGTAATCAATCCAACGAAGTGGGTGGAACAAGTGACAAAAACTTCAGTTTCTCAAAGGGTTCGGAGGACAATCTTCTTGATTTGAACTCATGGAAGTTTGGCCCTGGAAATGGTCCAGCGGAGCCTTACCAAACTTATGGTGGGAGTGGGGCTAGTAATATGTTGAAGACCCCAATGTCTCAGCAATCAAAATCTCAAACAAGTGAAGCTGTTGATGCAGCCAACAGGAAAGCAAAATCTGGGGAGGAAAATGCTGTGCCTATGGAAAGAAATTCCACTTGGCTTGGAAGTACAAAGTATGAGCTCATTCAAAGCAAAGAACCTAGGGAACTGGATCGACAGCTAAAATTTAGTAGTTCTTCTCTGAAAGAGAACTTGGTTGATAATGCTTTGTCGAGAAATGATGATAATGTGAATTTGTCATTGGACCCGTGGAAAGATTGTTCCGTGAAGACTGTTTTCCCGTTCTCAACGGGAGCAGGGGATGTGTCTACGAGCTATAATGGGTCAACTTATTTAGGCAGAAAAGAGGAGAAGAGAAAGGAAGAAACAAGTGATGCCAGAGCAGCAATAAAAGAGCAGGTGGATGAAGTGGGGAGGGCTTTGTACTTAGGAAAGTTGCAAGGCAGTTCCGAACAGAATAATTTCAGCAGCCTAAGTTTCCCTCTTTCACCAGAGAACCAGAAGGAAGAATTTCCTCGGCTTCCTCCTGTTAAAATCAAGTCAGAAGATAAGCAGTTGGCTATTAATTGGGAGGAGAAGTTTGAGCGCGATGGACTGTCCGCAAAACTCAGTGGTTCTACTGACAACACTTTGCTTATTGGGTCATATTTGGATGTGCCCATTGGACAAGAAATTAAAACTGCAGGTATGAGGAGGCCTTCAGGGGGTAGTTGGCTGTCTGTGAGTCAAGGGATTGTAGAGGATACGTCTGATCTTGTATCTGGTTTTGCAACAATTGGCGATGGGTTGAGTGAATCTATTGACTATCCAAATGAATATTGGGACTCTGATGAATATGACGATGATGATGATGTTGGGTACATGAGACAACCCATTGAGGATGAGGCCTGGTTTTTGGCACATGAAGTTGATTACCCTAGTGACAATGAAAAGGGGACCACACATGGAAGTGTTCCAGATCCTCAAGAAAGAGGTCCGGCCAAAGATGACGATGATGATCAGTCTTTTGCTGAGGAGGATTCTTNNNNNNNNNNNNNCACTGTTTCGGATGATCCCATTGGTCTTACGGTTACTGAAATGTATGGAGGAACAAATGATATTGACACAATTGGTCAATACAATGGACAATTGATTGACGATGAAGAATTGAATCTGATGCGAGTGGAACCTGTATGGCAGGGGTTTGTCTCCCAGACAAATGATCGCACCATGTTAGGAAATGGGAAGCTTCTAAATGATAGTGGAAGATCACGACTTGAAGATATCTGTATGGAAGATGATCAGCATGGTTCGGTTAGGTCAATTGGAGTGGGGATTAACAGTGATGCTGCTGACTTTGGCAGTGAAGTGCATGGAAGTTTGATTGGGGGTAGTAGCGAAGGGGATTTAGAATATTTCCGTGATCGAGATGTCGGGATTGGTGGCTCCAAACACAGTCATGATTTGGATAACATTTCGAACAAATCGATAAAAAGCAAGAAAAAAAGTGACAAGAGTGAGTTGAATAAATACATCATTGGGGGTGATAAAGATGCACGCTTACAGATGAAAACGAATAATGATGTGAACTTCTCATTCCCCCAAACTTTAAATGATGGCCAGATTATTCAAGCTGGTCCCAGTAAGGCTCTATGGTCAAGTAGTTGTAATGTGGACGAAAGAGATGATCGTCTTAATGCATATGTGGGAACCGATGACATGCTTTCTTCTTGGAGGCGAAAGAGCAGCGATTCTTCTCCCGTTAAAAGTTCTAGGGATGATAATAATGCTAATATGGTGAGGTCAACAAACTCTTCCCCGACCACATTATCAAATTATGGGTATACTGAAACAGATCATGCCAAGCTAGAAGAGGATGAAAAAGGTGGCACTGAAAGGGAAGACGAACTAGGCGCCTCACTAGATGATGAAGAGGCTGCTGCTGTGCAAGAGCAGGTAAGGCAAATAAAAGCCCAGGAGGAGGAGTTTGAAACCTTCAATCTGAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAAGACAAGCATTTCCATGTTGTTTTGAATTCGGTAATAGCTGGCCGTTATCATGTCACTGAGTATCTGGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCATGACCTGCACACGGGCATGGATGTTTGTGTTAAAATTATAAAAAACAACAAGGACTTCTTTGACCAAAGCCTTGATGAAATCAAGCTTCTGAAGTATGTCAATAAGCATGATCCTGCTGACAAGTATCACCTTCTGCGATTATATGATTATTTCTATTATAGAGAACATTTGTTAATAGTATGCGAGCTACTTAAAGCCAATTTGTACGAGTTTCATAAATTCAACAGAGAATCAGGCGGTGAAGTCTACTTCACAATGCCTAGATTACAGTCAATTACCATTCAGTGTTTGGAAGCACTTCAGTTTTTGCACAGCCTTGGACTAATACATTGCGACCTAAAGCCGGAGAACATTTTGGTTAAAAGCTATAGCAGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAGACGGATCACCTTTGCTCCTATGTTCAGTCCAGGTCCTATCGTGCACCTGAGGTCATTTTGGGACTTTCATATGACAAGAAGATTGATATTTGGTCACTTGGATGCATCTTGGCAGAACTTTGCACTGGCAATGTTCTTTTCCAAAATGATTCCCCTGCAACATTACTCGCCCGGGTGATTGGGATCATTGGTCCAATTGATCAAAGTATGCTTGCAAAGGGACGAGATACATACAAGTACTTCACCAAAAATCATATGCTTTATGAACGGAATCAGGAATCCAACAAGTTAGAATACCTGATCCCGAAAAAGACGTCATTGAGGCATAGATTGCCGATGGGAGATCAAGGTTTCATTGACTTTGTTGCTCATTTGCTCGAGGTTAACCCAAAGAAGCGGCCCTCTGCGGCTGAGGCCTTGAAGCACCCTTGGTTATCATACCCCTATGAACCCATATCATCTTGA 3507 0.4251 MSDPNSVDVILEFLRRNRFTRAEAALRSELGNRSDVNGFLQKLKLEEKELCNVSHDDKGTTVLESRGSDSRDSVDGSKELIVKEIEYGTSRNNVESKRKAAASTGERNQSNEVGGTSDKNFSFSKGSEDNLLDLNSWKFGPGNGPAEPYQTYGGSGASNMLKTPMSQQSKSQTSEAVDAANRKAKSGEENAVPMERNSTWLGSTKYELIQSKEPRELDRQLKFSSSSLKENLVDNALSRNDDNVNLSLDPWKDCSVKTVFPFSTGAGDVSTSYNGSTYLGRKEEKRKEETSDARAAIKEQVDEVGRALYLGKLQGSSEQNNFSSLSFPLSPENQKEEFPRLPPVKIKSEDKQLAINWEEKFERDGLSAKLSGSTDNTLLIGSYLDVPIGQEIKTAGMRRPSGGSWLSVSQGIVEDTSDLVSGFATIGDGLSESIDYPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEVDYPSDNEKGTTHGSVPDPQERGPAKDDDDDQSFAEEDSXXXXXTVSDDPIGLTVTEMYGGTNDIDTIGQYNGQLIDDEELNLMRVEPVWQGFVSQTNDRTMLGNGKLLNDSGRSRLEDICMEDDQHGSVRSIGVGINSDAADFGSEVHGSLIGGSSEGDLEYFRDRDVGIGGSKHSHDLDNISNKSIKSKKKSDKSELNKYIIGGDKDARLQMKTNNDVNFSFPQTLNDGQIIQAGPSKALWSSSCNVDERDDRLNAYVGTDDMLSSWRRKSSDSSPVKSSRDDNNANMVRSTNSSPTTLSNYGYTETDHAKLEEDEKGGTEREDELGASLDDEEAAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKHFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQSMLAKGRDTYKYFTKNHMLYERNQESNKLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSAAEALKHPWLSYPYEPISS 1168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02881 1168 Coils Coil 809 829 - -
Adu05g02881 1168 ProSitePatterns Serine/Threonine protein kinases active-site signature. 983 995 IPR008271 GO:0004672|GO:0006468
Adu05g02881 1168 PANTHER DUAL SPECIFICITY PROTEIN KINASE 2 1166 - -
Adu05g02881 1168 MobiDBLite consensus disorder prediction 58 77 - -
Adu05g02881 1168 MobiDBLite consensus disorder prediction 737 803 - -
Adu05g02881 1168 Gene3D Transferase(Phosphotransferase) domain 1 911 1159 - -
Adu05g02881 1168 Pfam Protein kinase domain 857 1159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02881 1168 SUPERFAMILY Protein kinase-like (PK-like) 844 1161 IPR011009 -
Adu05g02881 1168 MobiDBLite consensus disorder prediction 740 776 - -
Adu05g02881 1168 Gene3D Phosphorylase Kinase; domain 1 851 938 - -
Adu05g02881 1168 MobiDBLite consensus disorder prediction 467 522 - -
Adu05g02881 1168 SMART serkin_6 857 1159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02881 1168 MobiDBLite consensus disorder prediction 94 131 - -
Adu05g02881 1168 ProSiteProfiles Protein kinase domain profile. 857 1159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02881 1168 MobiDBLite consensus disorder prediction 778 796 - -
Adu05g02881 1168 MobiDBLite consensus disorder prediction 94 176 - -
Adu05g02881 1168 MobiDBLite consensus disorder prediction 152 176 - -
Adu05g02881 1168 CDD PKc_DYRK_like 857 1159 - -
Adu05g02881 1168 PANTHER - 2 1166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02881 Adu-Chr5 97466839 97474692 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02881 856 1154 MAP Kinase Gene Family AT5G19010 30.721 1.50e-29 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Adu05g02881 Pkinase 8.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02881 - - gmx:100786225 1770.75