Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02869 ATGGAAGGAGGAGTAGTACCATCGTCTTCTTCTTCCTCAGCATATAGAGAGTGCTTGAGGAACCATGCAGCCAGCCTCGGCAGCTATGCCACCGACGGCTGCGGAGAGTTCACCTTGGATGACATCAGCGGTGGCAGCAATAGTCTGCAGTGTGCAGCATGTGGCTGCCACCGCAATTTTCATCGCAAAGTGAACAATTACCCTCAGAACGGAGCGTCCCCTTCTGAGGGTACTGCAAACACGGCTCACGAGCTCATGAACTACTCAGAAGAGCGCGCCATAGCCGAAGAAGGCATAGAAAGAGGAATAATAATGGGAACTAATAATAATAATATTAATATTAATAGCAGCAGCAACAACAAAAAGAGGTTCAGGACGAAATTCAGCGAGGAGCAGAAGGAGAAGATGTTAGGGTTTGCGGAGAAGATTGGTTGGAAGCTTCAAAGAATTAGCAAAGAGACTGAAGATGAAGTTGAGAGGTTCTGTAGAAGTGTTGGTGTGAGTAGACAAGTTTTCAAGGTTTGGATGCATAACCACAAGAACAATTCTTCCTTTAATTCTTCTAATTCTGCTTCCAATGGCAATGCTTCATCTCTCACTCAGTAG 606 0.4554 MEGGVVPSSSSSSAYRECLRNHAASLGSYATDGCGEFTLDDISGGSNSLQCAACGCHRNFHRKVNNYPQNGASPSEGTANTAHELMNYSEERAIAEEGIERGIIMGTNNNNININSSSNNKKRFRTKFSEEQKEKMLGFAEKIGWKLQRISKETEDEVERFCRSVGVSRQVFKVWMHNHKNNSSFNSSNSASNGNASSLTQ 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02869 201 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 121 181 IPR006455 -
Adu05g02869 201 MobiDBLite consensus disorder prediction 182 201 - -
Adu05g02869 201 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 11 10 190 - -
Adu05g02869 201 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 15 63 IPR006456 -
Adu05g02869 201 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 15 64 IPR006456 -
Adu05g02869 201 SUPERFAMILY Homeodomain-like 109 181 IPR009057 -
Adu05g02869 201 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 10 190 - -
Adu05g02869 201 Pfam ZF-HD protein dimerisation region 14 65 IPR006456 -
Adu05g02869 201 Gene3D - 106 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02869 Adu-Chr5 97102012 97102877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02869 15 181 ZF-HD Transcription Factor Family AT4G24660 42.541 9.74e-43 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Adu05g02869 ZF-HD_dimer 2.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02869 - - adu:107490538 348.591