Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02837 ATGTTGTCATCCTCAACCTCAAGGATTACTTTCATTTTTAGGTATTCTCTTCTCCAAATCCCTAATTTTGTTTCCTTCCCTTCCTCTTCATCTTCATTCTCATCCCTTCACTCTCATTCTGTGCCCCCATCCACTCGCCAAGTTGATGAAGCTGTTGATTCCTTCACTCGCATGCTCTCTATGCGTCGTACTCCTCCCATCATCGAATTTAACCAGATTTTGGGATCTCTTTCCAAGACGAAGCATTTCCACGTCGCCGTTTCCCTTTTTCAGCAATTGCAAGCCAGGGGAATTGCGCCCAGCATAGTCACTTTGAATATCTTAATCAATTGTTGCTGCGGCATGGGTCGTATGACGCTTGCTTCCTCTGTATTGGCCAAGATTTTCAGAATGGATTATCAACCTAATACGGTAACATTGACAACAATCCTGAAAGGTCTCTGTCTCTCTGGTAGTGTTGAAAAGGCAGTGCGCTTTCATGACAGAGTGGTGGCTCATGGATTTCACTTCGACCAAGTCACTTATGGGACCTTGATCAATGGCCTCTGTAAGACCGGACACACATCAGCTGCTATTCAAGTGTTGAGAAAGATCCCACGGTATGGCATTGCTCCTGATGTCTTGATCTACAACACAATTATTGATAGCCTCTGCAAGGATACACTTGTGAGTCAGGCTTTTCATTTATACTCTGGAATGCTTGCTAAGGGAATTTCTCCCGATGTTATCACATACAATTCTCTCATTTTTGGATTGTGTCTTGTGGGTCAATTTAAGGAAGCCGTTGATATACTAAATCATATGATGCTTAAAAACATTACTCCTAATGTTTATACCTATACTACTTTGATTGATGGGCTATGCAAGGAAGGAAAGATCAAAGATGCTAAGAGTGTATTGGCTGTAATGGCAAAACGTGGTGTGAAACCAAATGTAGTTACTTATAACAGCCTAATGGATGGATATTGTTTGGTTAATCAGGTAAATAAGGCAAAATATGTATTCAACACAATGGCCCAAAGTAGAGTGTCACTTGATGTTCAAAGTTACAATATCATGATTAATGGCTTGTGCAAAAGTAAAATGGTGGATGAAGCCTTGAATCTTTTTGAAGAAATGCGTCGTAGGTACTTGGTTCCAAACACGGTAACTTACAACACTCTTATTGATGGCTTGAGCAAATCAAAGAGAATCTCTTGTGCTTTGGAGCTTCTTGTCAAGATGCACGAAGGAGGTCCACCCGCTAATGTAGTCACTTACAATTCCTTGTTGGATGGGATGTTCAATATCAAACAAGTTGACAAGGCACTTATGTTATTCAAGCAAATGAAAGAGAGTGGCATTGATCCAAATATAGTCACGTATAGTATACTTATTGATGGCCTATGCAAAGGTGGAAGACTTAGGCTTATTGAATTGATAAAAGAAGAGGAAGATACTGTTGAGATGGCCCTCGATACTGCCCGAGGAATAAACCATTTGCACAACTGCACTCGAGTGATTGTACACCATGATTTGAAGTCACTAAATCTTCTTGTTGATAAAAATTGGGTTGTGAAGTTATGTGATTTTGGCTTATCAAGAATGAAGCACAGTACATTCCTTTCTTCCAGATCAACTGCAGGAACACCCTCCTATGTAGCTGGCACTGTTCCAACAGCCAACAGTTCTCTCATAACTAACTCTTGTAACTCTTCTCTAGACTTTACCAGCTCACTCTACTACGATGAATGGTCTTTGGTAACAAATGAGCAAATCTTTCTTAATTTTGTTGAGGCCTAA 1782 0.4035 MLSSSTSRITFIFRYSLLQIPNFVSFPSSSSSFSSLHSHSVPPSTRQVDEAVDSFTRMLSMRRTPPIIEFNQILGSLSKTKHFHVAVSLFQQLQARGIAPSIVTLNILINCCCGMGRMTLASSVLAKIFRMDYQPNTVTLTTILKGLCLSGSVEKAVRFHDRVVAHGFHFDQVTYGTLINGLCKTGHTSAAIQVLRKIPRYGIAPDVLIYNTIIDSLCKDTLVSQAFHLYSGMLAKGISPDVITYNSLIFGLCLVGQFKEAVDILNHMMLKNITPNVYTYTTLIDGLCKEGKIKDAKSVLAVMAKRGVKPNVVTYNSLMDGYCLVNQVNKAKYVFNTMAQSRVSLDVQSYNIMINGLCKSKMVDEALNLFEEMRRRYLVPNTVTYNTLIDGLSKSKRISCALELLVKMHEGGPPANVVTYNSLLDGMFNIKQVDKALMLFKQMKESGIDPNIVTYSILIDGLCKGGRLRLIELIKEEEDTVEMALDTARGINHLHNCTRVIVHHDLKSLNLLVDKNWVVKLCDFGLSRMKHSTFLSSRSTAGTPSYVAGTVPTANSSLITNSCNSSLDFTSSLYYDEWSLVTNEQIFLNFVEA 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02837 593 ProSitePatterns Serine/Threonine protein kinases active-site signature. 501 513 IPR008271 GO:0004672|GO:0006468
Adu05g02837 593 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 136 170 IPR002885 -
Adu05g02837 593 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 276 310 IPR002885 -
Adu05g02837 593 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 416 450 IPR002885 -
Adu05g02837 593 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 171 205 IPR002885 -
Adu05g02837 593 Gene3D Tetratricopeptide repeat domain 268 341 IPR011990 GO:0005515
Adu05g02837 593 Gene3D Tetratricopeptide repeat domain 342 409 IPR011990 GO:0005515
Adu05g02837 593 Gene3D Tetratricopeptide repeat domain 200 267 IPR011990 GO:0005515
Adu05g02837 593 Gene3D Tetratricopeptide repeat domain 410 476 IPR011990 GO:0005515
Adu05g02837 593 Gene3D Transferase(Phosphotransferase) domain 1 477 580 - -
Adu05g02837 593 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 206 240 IPR002885 -
Adu05g02837 593 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 381 415 IPR002885 -
Adu05g02837 593 PANTHER OS10G0495100 PROTEIN 39 471 - -
Adu05g02837 593 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 39 471 - -
Adu05g02837 593 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 66 100 IPR002885 -
Adu05g02837 593 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 101 135 IPR002885 -
Adu05g02837 593 SUPERFAMILY HCP-like 248 451 - -
Adu05g02837 593 Gene3D Tetratricopeptide repeat domain 43 199 IPR011990 GO:0005515
Adu05g02837 593 Pfam PPR repeat 306 338 IPR002885 -
Adu05g02837 593 Pfam PPR repeat 202 233 IPR002885 -
Adu05g02837 593 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 311 345 IPR002885 -
Adu05g02837 593 Pfam Protein kinase domain 458 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02837 593 TIGRFAM PPR: pentatricopeptide repeat domain 173 207 IPR002885 -
Adu05g02837 593 TIGRFAM PPR: pentatricopeptide repeat domain 138 171 IPR002885 -
Adu05g02837 593 TIGRFAM PPR: pentatricopeptide repeat domain 418 452 IPR002885 -
Adu05g02837 593 TIGRFAM PPR: pentatricopeptide repeat domain 313 346 IPR002885 -
Adu05g02837 593 TIGRFAM PPR: pentatricopeptide repeat domain 383 412 IPR002885 -
Adu05g02837 593 TIGRFAM PPR: pentatricopeptide repeat domain 278 312 IPR002885 -
Adu05g02837 593 TIGRFAM PPR: pentatricopeptide repeat domain 70 101 IPR002885 -
Adu05g02837 593 TIGRFAM PPR: pentatricopeptide repeat domain 103 137 IPR002885 -
Adu05g02837 593 TIGRFAM PPR: pentatricopeptide repeat domain 349 381 IPR002885 -
Adu05g02837 593 TIGRFAM PPR: pentatricopeptide repeat domain 243 277 IPR002885 -
Adu05g02837 593 TIGRFAM PPR: pentatricopeptide repeat domain 209 242 IPR002885 -
Adu05g02837 593 ProSiteProfiles Protein kinase domain profile. 322 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02837 593 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 346 380 IPR002885 -
Adu05g02837 593 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 241 275 IPR002885 -
Adu05g02837 593 SMART serkin_6 403 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02837 593 Pfam PPR repeat family 70 113 IPR002885 -
Adu05g02837 593 Pfam PPR repeat family 346 394 IPR002885 -
Adu05g02837 593 Pfam PPR repeat family 240 289 IPR002885 -
Adu05g02837 593 Pfam PPR repeat family 135 184 IPR002885 -
Adu05g02837 593 Pfam PPR repeat family 416 464 IPR002885 -
Adu05g02837 593 SUPERFAMILY Protein kinase-like (PK-like) 475 548 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02837 Adu-Chr5 96455451 96459279 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02837 14 478 Glycosyltransferase AT1G05670 26.181 3.45e-52 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Adu05g02837 Pkinase 2.1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02837 - - ahf:112803886 734.176