Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02798 ATGGCCCTCGATACTGCCCGAGGAATAAACCATTTGCACAACTGCACTCCAGTGATTGTACACCGTGATTTGAAGTCACTAAATCTTCTTGTTGATAAAAATTGGGTTGTGAAGTTATGTGATTTTGGATTATCAAGAATGAAGCACAGTACATTCCTTTCTTCCAGATCAACTGCAGGAACAGCCGAGTGGATGGTGCCTGAAGTGTTAAGAAATGAACCTTCAAATGAAAAGTGCGATGTTTATACTTTGGAGTCATATTATGGGATCTCTCTACTTTGCAACAGCCCTGGGGTGGAATGA 303 0.4125 MALDTARGINHLHNCTPVIVHRDLKSLNLLVDKNWVVKLCDFGLSRMKHSTFLSSRSTAGTAEWMVPEVLRNEPSNEKCDVYTLESYYGISLLCNSPGVE 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02798 100 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 83 - -
Adu05g02798 100 ProSitePatterns Serine/Threonine protein kinases active-site signature. 19 31 IPR008271 GO:0004672|GO:0006468
Adu05g02798 100 SUPERFAMILY Protein kinase-like (PK-like) 1 83 IPR011009 -
Adu05g02798 100 Gene3D Transferase(Phosphotransferase) domain 1 1 94 - -
Adu05g02798 100 ProSiteProfiles Protein kinase domain profile. 1 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02798 100 Pfam Protein kinase domain 2 84 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02798 100 PANTHER OS06G0232100 PROTEIN 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02798 Adu-Chr5 95859848 95861637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02798 1 92 MAP Kinase Kinase Kinase AT1G73660 78.261 8.51e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Adu05g02798 Pkinase 1.9e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02798 - - gmx:100788742 164.851