Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02756 ATGGTAATGATTGCTTTCTACTGGGCACACTACGAACCATGTATTCTACGCTCCAAGAGCTGGTTGACATTTCTGCCAAAAGTAAAGCACCAAGAAATGCTGTCACTAGGGAAGAATCTGCTGAAATTGCGAAAGAAAAGTTTGTTACTTAATCAGGGAAATCAAGGTTACAAAGACAAGTGGCAGAAAGCCATTGGATTTTATTCAGAAACCATAAAACTAAGCAGCAACAATGCAACATACGACAGTAATAGGTCCCAAGCTTATCTAGAACTTGGAAGTTACCTCCAAGCTGAGGCAGATTGTACAAAAGCAATTAACCTTGACAAAAAGAATGTCAAAGTGTATTTTAGAAGAGGTAGAGCTAGAGAGATGCTTGGCTACTATACCGATGCAATTGATGATTTTCAACATGCCTTGGTACTTGAACTAACCAACAAAATGGCATCCTCCGCCGCCGAAAGATTGAGGAAACTATTCCAGTAG 486 0.3992 MVMIAFYWAHYEPCILRSKSWLTFLPKVKHQEMLSLGKNLLKLRKKSLLLNQGNQGYKDKWQKAIGFYSETIKLSSNNATYDSNRSQAYLELGSYLQAEADCTKAINLDKKNVKVYFRRGRAREMLGYYTDAIDDFQHALVLELTNKMASSAAERLRKLFQ 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02756 161 PANTHER AMIDASE 1 51 161 - -
Adu05g02756 161 SMART tpr_5 113 146 IPR019734 GO:0005515
Adu05g02756 161 SMART tpr_5 79 112 IPR019734 GO:0005515
Adu05g02756 161 SUPERFAMILY TPR-like 58 149 IPR011990 GO:0005515
Adu05g02756 161 Pfam Tetratricopeptide repeat 84 112 IPR019734 GO:0005515
Adu05g02756 161 Gene3D Tetratricopeptide repeat domain 29 161 IPR011990 GO:0005515
Adu05g02756 161 PANTHER OUTER ENVELOPE PROTEIN 64, CHLOROPLASTIC 51 161 - -
Adu05g02756 161 ProSiteProfiles TPR repeat profile. 113 146 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02756 Adu-Chr5 95200263 95201830 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02756 49 142 U-box Gene Family AT3G07370 32.632 5.98e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02756 - - ahf:112802326 303.908