Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02738 ATGCAACGCCCCCTCCAACTATTGCATGCAGTACCTTTTCACTGTCGCACCCATGGACGCAACGTCTCCCTCACCCCCACCGCTGCACGCACGCAATCCTTCTACCACACGCACGAACGCAACGTCCTCCCTCCGACAAGTCTTATAAGCTCCGATGGTTTCTCCCCACAGGTGGAGCATCGGTCTTTCACCCTCGAAGAGGACGACACCATAATCGGAGCTCACGTTCAGTTCCGCAACAAGTGGGCCACCATAGCCCGATTCCTTTTCGGCAGAACCGACAATGCCATTAAGAATCACTGGAACTCCACCCTCAAACGCAAGTGCACCTCCATAGACCCCATCGACGATCCTTACTTCGCGCAGCCACTCAAACGCTCCGTTAGCGCCGGCGCCGCCATACTCGTGTCAACGGTGGTGGTGAGGTACTCGTTACCGACGGTGATGGTGACGACGGAGATGGCGGGCAGGAACGGGAGGATGCAGATGGAGAACCAGGAGTGTGCAATGGAGATGTCAGAGATGATGGTGGCGACGCGGGAGTTCTCAAGGGAGACAATGAAATCAATGGCAGTGTTGGAGAAAGCTTGGAGGATTCAGGGTTAG 606 0.5594 MQRPLQLLHAVPFHCRTHGRNVSLTPTAARTQSFYHTHERNVLPPTSLISSDGFSPQVEHRSFTLEEDDTIIGAHVQFRNKWATIARFLFGRTDNAIKNHWNSTLKRKCTSIDPIDDPYFAQPLKRSVSAGAAILVSTVVVRYSLPTVMVTTEMAGRNGRMQMENQECAMEMSEMMVATREFSRETMKSMAVLEKAWRIQG 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02738 201 Gene3D - 62 108 - -
Adu05g02738 201 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 109 IPR017930 -
Adu05g02738 201 CDD SANT 62 105 IPR001005 -
Adu05g02738 201 Pfam Myb-like DNA-binding domain 62 104 IPR001005 -
Adu05g02738 201 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 54 137 - -
Adu05g02738 201 PANTHER MYB PROTEIN-RELATED 54 137 - -
Adu05g02738 201 SMART sant 59 107 IPR001005 -
Adu05g02738 201 ProSiteProfiles Myb-like domain profile. 55 105 IPR001005 -
Adu05g02738 201 SUPERFAMILY Homeodomain-like 54 110 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02738 Adu-Chr5 94944302 94948266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02738 54 147 MYB Transcription Factor Family AT5G67300 59.375 9.78e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu05g02738 Myb_DNA-binding 3.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02738 K09422 - aip:107641435 165.236