Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02725 ATGGATATCGAGGAGGACATTCGTTCTTTACAGCTTGATTCTGCGGAAGAGACTAATGGATCAGTAACGCCAGAGGATGTGAAGCCAGAAGTTGATAAATCTGAACATATGGATGAAGATCCAAAACCAGAAGTTCAAGCAGAACCTATCGATGTTGAACCAAAAGCAAAAGAGAAGGAAATTCCTCCTACACAGGACGAAGATGATGAGGCGGAGATGATGAAAAAAAGGCACTTAAATGTTGTGTTTATTGGTCATGTAGATGCTGGTAAATCTACAACAGGAGGTCAGATATTGTTTCTAAGTGGCCAGGTTGATGAAAGAACTATCCAAAAATATGAGAAAGAAGCTAAAGACAAAAGTAGAGAAAGCTGGTATATGGCTTATATTATGGACACAAACGAGGAGGAGAGAGTAAAGACAACAAGGTTTACAATTTTGGATGCACCTGGTCACAAAAGTTATGTACCTAACATGATCAGTGGTGCATCTCAGGCTGATATTGGAGTGTTGGTAATTTCAGCTCGAAAGGGAGAATTTGAAACAGGATACGAGAGAGGTGGACAAACTCGTGAACATGTCCAGCTCGCAAAAACGCTGGGGGTGGCTAAATTGCTTGTTGTTGTCAATAAAATGGATGAGCCGACTGTGGAATGGTCGAAAGAAAGGTATGATGAAATTGAGTCCAAAATGACACCATTTCTAAGACAATCAGGATACAATGTGAAAAAAGATGTCATTTTTCTACCAATATCTGGGTTGGTCGGTACAAATATGAAGACAAGAGTGGATAAAAAAATCTGCCCATGGTGGAATGGCCCATGCTTATTTGAAGCACTTGACGCTGTTGAAGTTCCTGAGCGAGACCCCAAAGGCCCCTTTAGGATGCCTATAATTGACAAATTCAAAGACATGGGAACTGTTGTTATGGGAAAAGTGGAATCTGGTACCGTTCGTGAGGGAGATTCCTTGTTGGTTATGCCAAATAAGGCTCAAGTAAAAGTTGTTGCTATATTTATTGATGAGGATAAGGTAAAACGTGCTGGACCTGGTGAAAATTTAAGGATTAGATTATCTGGTGTTGAAGAAGACGACATATCAAGTGGGTTTGTCCTATCAAGTGTTGCAAATTCAATACCAGCTGTTACTGAGTTTGTTGCTCAATTGGCAATCCTTGAATTGCTGGACAATGCTATTTTTACTGCGGGGTATAAGGCTGTTTTGCATATCCACTCTGTTGTTGAAGAATGTGAGATTATTGAGCTCTTACATCAAATTGATCCAAAAACAAGGAAGCCTATGAAAAAAAAGGTCCTCTTCGTGAAGAACGGGGCTAATGTTGTGTGCCGAATTCAGGTTAATAGCATGATATGCATTGAGAAGTTCTCTGATTTTCCACAGCTTGGGAGATTTACTCTTCGCAGTGAAGGGAAAACTGTTGCAGTGGGGAAGGTTACTGCTCTGTGTTGTGTTTCACTATCGTGTGTGTGCGCTAATTCTTTTGGATCTTTGTCACTTTGTGTGAGCAGGACATGA 1536 0.4056 MDIEEDIRSLQLDSAEETNGSVTPEDVKPEVDKSEHMDEDPKPEVQAEPIDVEPKAKEKEIPPTQDEDDEAEMMKKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKTTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVAKLLVVVNKMDEPTVEWSKERYDEIESKMTPFLRQSGYNVKKDVIFLPISGLVGTNMKTRVDKKICPWWNGPCLFEALDAVEVPERDPKGPFRMPIIDKFKDMGTVVMGKVESGTVREGDSLLVMPNKAQVKVVAIFIDEDKVKRAGPGENLRIRLSGVEEDDISSGFVLSSVANSIPAVTEFVAQLAILELLDNAIFTAGYKAVLHIHSVVEECEIIELLHQIDPKTRKPMKKKVLFVKNGANVVCRIQVNSMICIEKFSDFPQLGRFTLRSEGKTVAVGKVTALCCVSLSCVCANSFGSLSLCVSRT 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02725 511 Gene3D - 58 287 IPR027417 -
Adu05g02725 511 Pfam Elongation factor Tu C-terminal domain 379 488 IPR004160 -
Adu05g02725 511 MobiDBLite consensus disorder prediction 26 71 - -
Adu05g02725 511 PRINTS GTP-binding elongation factor signature 145 155 IPR000795 GO:0003924|GO:0005525
Adu05g02725 511 PRINTS GTP-binding elongation factor signature 205 214 IPR000795 GO:0003924|GO:0005525
Adu05g02725 511 PRINTS GTP-binding elongation factor signature 161 172 IPR000795 GO:0003924|GO:0005525
Adu05g02725 511 PRINTS GTP-binding elongation factor signature 80 93 IPR000795 GO:0003924|GO:0005525
Adu05g02725 511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 297 IPR027417 -
Adu05g02725 511 Pfam Elongation factor Tu domain 2 306 372 IPR004161 GO:0005525
Adu05g02725 511 PANTHER BNAA06G12300D PROTEIN 27 489 - -
Adu05g02725 511 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 76 291 IPR000795 GO:0003924|GO:0005525
Adu05g02725 511 CDD EF1_alpha 80 287 - -
Adu05g02725 511 CDD eRF3_C_III 380 488 - -
Adu05g02725 511 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 383 487 IPR009001 -
Adu05g02725 511 Pfam Elongation factor Tu GTP binding domain 76 268 IPR000795 GO:0003924|GO:0005525
Adu05g02725 511 SUPERFAMILY Translation proteins 285 377 IPR009000 -
Adu05g02725 511 Gene3D Translation factors 291 376 - -
Adu05g02725 511 MobiDBLite consensus disorder prediction 1 71 - -
Adu05g02725 511 CDD eRF3_II 293 374 - -
Adu05g02725 511 Gene3D Translation factors 381 489 - -
Adu05g02725 511 PANTHER TRANSLATION FACTOR 27 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02725 Adu-Chr5 94735550 94742217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02725 76 488 Eukaryotic Initiation Factors Gene Family AT5G60390 36.427 3.79e-89 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02725 K03267 - gmx:100793653 852.432