Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02674 ATGGAGGGCATCCTAGAGGATAACCCATCAAGCCAGGACGACTCCCAACCGCGTCGTCCGATCTCAGAACACCATGAAACCACAAACCAAGCAAAAATAGCAAGCACCATCCACCACGCAAACGAACACGTCACGACGGACCCACAACATCCTGAGAAAGCCAGAGACAAAGCGGCACAAATCATCCAGGAGCTCTGTCTCCGGGTCCAAGAACTTGAAGGCAAGTTAAACGACAGAGAAAAACAAAATAACGAGCACGGAAGCCATGCAACTTCCAGGTCAAGATCCCACCGCGGCAGATCGTCAACCCGGCAACGCAATAGGAGAGAAGATCGCAGCACCTCACGCAATCGCCGACGCGAGAAATCCCCTGAGCGACGATACGACAAGAAGCACCATCGCAGCGCTTCTCGGGATCTAAATCGTCAACACGATTTAGACGAAGACCGGAGATACCGAAGCACCAAacgcacgagaagcgaccacaccataatgggagctacaccctttacagaaggaatcttaagagcaaaactccccagagTGAACGTCATCACGGGCAAGGACGTGCCAAATAAGTCAAAACTAACAATAAAAAAAGACCTCAAGGTAATGGCCGTCAAAAACCACGACCCAGTCACCATTGCCGACAGCACGATAACCTTCTTACCCGAGGACTGCCAGCacggcacctcggccgaagatgcccccttcgtcatatcagcccgaatcggaacaggactaGGTTTTCATACAATTTCAATTCCTGCATTTCTCTCTTCCTCTTCCTCTGCTGCACATCTCACTGGCATATTCTCGCCGCCGCAATACGCCGCAACCTGCGACTGCCGCCGCCGCGCAAGACTGCTGACAGACATTCTCAAGGATGACAGCAATTCTAACTCTGAATTCGTGCAATCTTTTCATGGGAACCTGTGCGATGATGATGCCTTGAAAGTCATCAAGTTGGGGATTCCTGGATTCAAGAGCCGCGTTAAGTTCTTTAGTATTCTTGATCCAACAAGACCCTGTAATTATGTTTCTGAAATCTCTGATGCTGGATTTCTTGGTCCTCTTTTCAAGGTTACCATGGAAGAACATCCAACTGAAGCTTTCACAAACACATCAGCGGATAAGTGTTGGGAAACAATTCTTGACAGACTAAATGCTGAGATCGAGAGATGTAAGAGTCTAGGTGAACAAGAACTCCCTCCCTTGGAGGTTTTGCAAAGCATTAATGGTCATAAAATGTTCGGATTCCTTTATGGAAATGATGCCTCTAAGTGCTCAAATGGTTCAAGCAACTCTCTGGGTGATGTCAAGACCAAACTTTTCGGCTTCAATTTGATAAAGCAGGAGCAAGAAGATAACATAGAAGGACATTTTCGTTCATTTGAAGAGATGAAGTCATTGCTACAAGGATTCCTAAAAAAGGCCAGTCCTGCCGAGTTTAGTGCAATGCTCAAGTTATTTAGCTCTGATTCACAAGTTACTCAATGGAGAGCGGCATTCGTAGCATTGATCGAAGAGATCCAGAAAGGTTGTAGATAA 1551 0.4255 MEGILEDNPSSQDDSQPRRPISEHHETTNQAKIASTIHHANEHVTTDPQHPEKARDKAAQIIQELCLRVQELEGKLNDREKQNNEHGSHATSRSRSHRGRSSTRQRNRREDRSTSRNRRREKSPERRYDKKHHRSASRDLNRQHDLDEDRRYRSTKRTRSDHTIMGATPFTEGILRAKLPRVNVITGKDVPNKSKLTIKKDLKVMAVKNHDPVTIADSTITFLPEDCQHGTSAEDAPFVISARIGTGLGFHTISIPAFLSSSSSAAHLTGIFSPPQYAATCDCRRRARLLTDILKDDSNSNSEFVQSFHGNLCDDDALKVIKLGIPGFKSRVKFFSILDPTRPCNYVSEISDAGFLGPLFKVTMEEHPTEAFTNTSADKCWETILDRLNAEIERCKSLGEQELPPLEVLQSINGHKMFGFLYGNDASKCSNGSSNSLGDVKTKLFGFNLIKQEQEDNIEGHFRSFEEMKSLLQGFLKKASPAEFSAMLKLFSSDSQVTQWRAAFVALIEEIQKGCR 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02674 516 MobiDBLite consensus disorder prediction 77 165 - -
Adu05g02674 516 MobiDBLite consensus disorder prediction 1 57 - -
Adu05g02674 516 MobiDBLite consensus disorder prediction 77 92 - -
Adu05g02674 516 Coils Coil 55 82 - -
Adu05g02674 516 MobiDBLite consensus disorder prediction 104 160 - -
Adu05g02674 516 SMART fyrc_3 359 441 IPR003889 GO:0005634
Adu05g02674 516 Pfam F/Y rich C-terminus 357 421 IPR003889 GO:0005634
Adu05g02674 516 ProSiteProfiles FYR domain FYRC motif profile. 355 445 IPR003889 GO:0005634
Adu05g02674 516 PANTHER LYSINE-SPECIFIC DEMETHYLASE 317 421 - -
Adu05g02674 516 MobiDBLite consensus disorder prediction 43 57 - -
Adu05g02674 516 MobiDBLite consensus disorder prediction 27 42 - -
Adu05g02674 516 PANTHER LYSINE-SPECIFIC DEMETHYLASE 425 514 - -
Adu05g02674 516 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 317 421 - -
Adu05g02674 516 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 425 514 - -
Adu05g02674 516 Gene3D - 316 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02674 Adu-Chr5 93775948 93789012 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02674 327 512 JUMONJI Transcription Factor Family AT4G20400 39.175 2.36e-33 133