Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02671 ATGTCACACAGCAGCACACTACATTGGCTCACTAGATTAGACATTGCAATTGATGCTGCAAATGCATTGAGTTATCTTCATTATCATGGCATCGTCCATCACAATGTAAAATCCGACAATATTCTGCTAGACAAGAACCTTTGTGCTAAACTCGGTGGCTTAAATTTGTCAAGGAAACTTCCAGAAGGAGTTTCAATCGATGATACCTATGTTACAAGTGATTTAGTAGGGACACGTGGTTACATAGACCCAGAATATGTATCATATGGCAGGGTTGGTGCCACAGTTGATGTTTACAGCTTTGGAGTGGTTTTGTGTGAGCTTATATCATCCAAACTCGCTAAGTACTGGAAAGGTTGCGAGGAAGAGAGTATCGCTACAATTTTAAGCAAAAAAATTGGAAGCCAAGATATGAACAAGGTGTTGGATCCAAGACTTGGCTTCCAATCAGACCATAAAATCAAGCAGATGATAACTGCTGTAGCAGAGCTTGCACTTGAGTGCATGAATTCTCCACAAGAACTAAGGCCAAACATGGAACAAGTGTTAGAGATCCTCAATGGTATAAGACAAGAGAGATTTGAAGCAAACTCAGAAAAAGCTTTTAAAATCTTCCACCATGCTGAACTTGAAGAACCAACTAAACATTTTGACACTTGCCTTGGAAAGGGAGGGTTTGCCACTGTCTACTATGGAAAACTTAAGGATGGGCGCAAAATTGCAGTAAAACATTTCCACAACGAGACAGAAAAGTCCATCAAGCAATTCATGAAAGAAATACAGATCTTAAATCTCTTGCAGCATCAAAATTTGGTGTTACTTTATGGCGGCAGCTCTCGTCACAGGAAGAACCATCTTCTACTGTATGAGTACATCTCCAACGGCACCCTTTCTAAACGTCTTCAAGGACCTTCAAGTGAAAAGTTATCATGGCTTACTAGATTGAacattgccattgaaactgcaactgcattagtatatcttcatgattcaggtatcatccatcggaatgtgaaaggaagcaacattctcttggatgaaaagttgactgttaaggttgcggattttggactctcaaGGTTACTTCCAAGTTCTGTTACACATGTTTCAACCATGCCAGTGGGAACTCACGCTTACATAGATCCAGATTACTATGAATCTGGAAGAGTCAGTGATAGAAGCGATGTCTACAGCTTTGGCATGGTCTTGTTTGAGCTCATATCATCAAAACCACCTAGCTTGTTGGATGATGGAGAGATTGTTACTCTAGCCAAGTTTGGAATCACTAAGATGTTAAACAATGCAATGGAGGAGCTCGTGGATCCAATTTTCAAGTTTGGTTCAGATAAAAAGTTGATGGAAATGATAACAGCTGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCTAAAGATCTTAGACCTTCTATGAAACAGGTGCTGGAGACCCTAGAAGGAATAAAGAAGGGAACATGGGGATTCAACCAAATAACATAG 1497 0.3681 MSHSSTLHWLTRLDIAIDAANALSYLHYHGIVHHNVKSDNILLDKNLCAKLGGLNLSRKLPEGVSIDDTYVTSDLVGTRGYIDPEYVSYGRVGATVDVYSFGVVLCELISSKLAKYWKGCEEESIATILSKKIGSQDMNKVLDPRLGFQSDHKIKQMITAVAELALECMNSPQELRPNMEQVLEILNGIRQERFEANSEKAFKIFHHAELEEPTKHFDTCLGKGGFATVYYGKLKDGRKIAVKHFHNETEKSIKQFMKEIQILNLLQHQNLVLLYGGSSRHRKNHLLLYEYISNGTLSKRLQGPSSEKLSWLTRLNIAIETATALVYLHDSGIIHRNVKGSNILLDEKLTVKVADFGLSRLLPSSVTHVSTMPVGTHAYIDPDYYESGRVSDRSDVYSFGMVLFELISSKPPSLLDDGEIVTLAKFGITKMLNNAMEELVDPIFKFGSDKKLMEMITAVAELAFQCVQCPKDLRPSMKQVLETLEGIKKGTWGFNQIT 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02671 498 ProSitePatterns Protein kinases ATP-binding region signature. 221 243 IPR017441 GO:0005524
Adu05g02671 498 SUPERFAMILY Protein kinase-like (PK-like) 4 187 IPR011009 -
Adu05g02671 498 PANTHER TYROSINE KINASE FAMILY PROTEIN 2 498 - -
Adu05g02671 498 Pfam Protein kinase domain 16 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02671 498 Pfam Protein tyrosine and serine/threonine kinase 217 484 IPR001245 GO:0004672|GO:0006468
Adu05g02671 498 Gene3D Transferase(Phosphotransferase) domain 1 1 199 - -
Adu05g02671 498 ProSiteProfiles Protein kinase domain profile. 215 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02671 498 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 2 498 IPR044652 -
Adu05g02671 498 Gene3D Phosphorylase Kinase; domain 1 200 291 - -
Adu05g02671 498 SUPERFAMILY Protein kinase-like (PK-like) 200 488 IPR011009 -
Adu05g02671 498 ProSiteProfiles Protein kinase domain profile. 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02671 498 Gene3D Transferase(Phosphotransferase) domain 1 292 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02671 Adu-Chr5 93761101 93763010 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02671 204 488 Receptor kinase-like Gene Family AT1G25390 51.546 3.95e-92 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Adu05g02671 PK_Tyr_Ser-Thr 5.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02671 - - aprc:113866770 693.345