Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02670 ATGCCATCAGTGATGAGGATTGTGAGTAGGGATGGCAGCAGGTATCCCATGAATAGGGATGGGAACATCGGGATCGGCTGGAAATGGAACAAAGTGGAGTTCGGAGCTACATACACTAATATGGCTACTTTGTTAAAGTACTCGTACCGGAAAGGAAGACCGGTGACGATGACCACGAGAGAACCAAACCACGAGCCACGGGTGATAGAGCATAATAGCACCCAACCCAAACGCCAGGCAACAAAACGACGTGAGAGAGGCAATGCAACAGAGAGCAAGCAGAGCAATGACTATCAAGGGCAGGAGAGTGACAAGACACTGGAAGAAATATTCGTATGTTGGCCGACAAAGCGCAAAGTTATTTATCAGATTCGCGGACGATCATATGAGAAAACACTTGCAGTATTAGAAGTCATGCCTTATCGAGCCTGTGAACTGAAGGACTATGAAAAGGATCAGGCCTGTGGCTCGGCGACGAGCTTGTCAAATAGCAATCACCGTAAGAGGTTTACCAACATAACTCTTTCTACCCCTGATGAGATTTCAAACCACCCTCAACAATTTTCTTCAGATTTTGGGTTCCAATTTCATACATTCTCCTATGAAGAACTTTTAATAGCCACCAAGCATTTTGCTTCCTCCGGGATACTCGGAAAGGGAAGCTTTGGCATAGTATATCATGGTAAACTTCAAGATGGGAGACAGATTGCAGTCAAATCCTTGCGCGAAAACAATGACAAGAAAGTTCAACAGTTTGTCAATGAAATAGAAGTCTTAAGCAAATTGAGCCATCAAAACCTTGTCCCATTTTATGGCTACTGTCACCGCCATGACCATGAACTCATGCTAGTATTTGAATTTGTTTCCAATGGAACTCTGGCCGATCATCTTCATGGAAAGCGTAAGAAACAAGGCACTCTGGTACCCTGGCATACCAGATTGAACATAGCAATTGAGGCTGCAAGTGCATTGGCTTATCTTCATAATTCAGGAATTATTCACCGCGACATAAAATCCTCCAACATTCTTTTGGATGATAACTTGTGCGTTAAGGTAGCCGATTTTGGCCTTTCGCGCACGCTTCCTTTGGTTGTTTCAACCTCAAAAGAGGCTGCTACTTTTGCTTCTCATGCCTCAACTGCTCCACAAGGAACAAATGGATATATAGACCCTGACTATTTTCAATTTCACAGGGTTTGTGACAAGAGCGATACTTATAGCTTTGGCGTGGTTTTAGCCGAGATTATATCTTCGTTGCCAGCGGTTGATGATACATGGAATCCATATGAGGTACCATTACTGTCTCACCTTGCCATGAACAAAATCCAAAATGAAGCATTGCATGAGTTGGTGGATCCATGCCTTGGTTTTCAACCAGACAATGAGATTGGAGAATCTATAACTGCTGTGGCTGAGTTGGCATTTCAGTGCCTGCAATGTCCTAAGGAACTAAGGCCATCTATGAAGCAGAAAATCGGAGTCACCATTTCATTCAGCAACTTCTTACTTCCCAGAAATAATGACCTGATGAGGTTGAGGTGTGATCTTCTTCAGTGCTGCTTCACTGGCACTTCTTCAAATGGTGTTATTCAGATAAAGGGGAAAATCTTCCCCTACTTGATACTTGCACAAGCAACAAATAATTTTAATAAACGTAATTGTCTTGGAAAGATAGGCTTGAAGAATCTATACTATGGCAAACTTAGAGATGGGTGTGAGATTGTAATTGAAAGAGTATCATCCAATGACAAGAGGCAAATATTTCAGCAGTTCCTCAATGAAATTTTGGTTTCGAATATCCTGGATCACAAAAATCTCGTGACATTTCGCGGTTATGCCTTTCATCATGAGGAATTCCTGGTAGCACATGAATATCTCTCCAATGGCACTCTTGCTGCTTATCTTGAATGTGAAATCCAACATAATAAATGCACATTACCTTTGCTTACTCGAATGGAAATTGCCATCGATATTGCGAATGCATTGAGCTATCTTCACAAGCATGGCATCATCCACCATAACATAAACTCCAGCAATATTCTGCTAGATAAGAACATGTGTGCTAAAGTTGCTGGCTTGCACTTATCAAGGAAACTTCCAGAGGATGTTTCTGTCAATGCCACCAGCATTGTTTCAATTTCAAGTGGTATAGCAAAAAATTGTGTTTACATTGACCCAGAGTATGTGTCTCATGGCAGAGTCAGCACCAAGAATGATGTTTATAGCTTCGGAGTAGTGTTGTGCGATTTGATATCATCCAAGCTTGCTAAGTATTGGGAAGGTTGTGACCGAGAAAGTATTGCTGCACTTTTAGGCAGAAATATTGAAAATCAAGCTTTGGACAAGGTATTGGATCCAAGAACTGGCTTCCAATCAGACCATAAGATCATGCAGGTGATGACTGCAATGGCAGAGCTTGCACTTAATTGCATGGGATTTCCACAAGAACAAAGGCCAAATATGGAACAGGTGCTAGATATCCTCAATGGCAAGAGACTAGAGAGATATAAAACAATAGAAGCTTTCAGAATCTTTGACTATGCTGATCTCAGAAAAGCTACCATGCAATTTCATCCAGATAGGATCCTTGGAGAGGGAGGGTTCGGCAGCGTATTTTATGGAAAACTTCAAGATGGACTTGAAGTTGCAATAAAACGTTTCCACAACATGCGGGAAAATTCTCTTAAGCaattcatgaatgaaatcgagatcttgagactcttgcaccatagaaacctggtttcactctacggccgcagctctggtgaacataacgaactctttctagtctatgagtacgtccccaatggcactgtctctagacatattcatggaggtaaaattgaaaagctaccatggcttactagattgaatattgccatagaaactgcaactgcattggcatatcttcatgattcaggtatcatacaccgtgatgtaaaaggaagtaatatcctcttggatgaaaatttttctgttaaagttgcagatttcggactCTCACGGTCCCAACCAGATTACGTTACTCATGTGTCAACAGCTCCAGCAGGGACAAATGCCTATATGGATCCGGAATATTTCCAAACAGGCAGGGTTTCCTATAGAAGTGATGTATATAGCTTTGGAGTGGTCTTGTTTGAGCTCATATCATCTAAACCTGCATTTTGGAGGGACGTCCCACACGGTGAGGCGGTTGGCCTCGCTAAGTTTGCAATCATCAAACTGTTAAATAACACATTGAAGGAGCTAGTAGATCCAGATATTGGGTATGATTCAGATAAAGATGTAACGGAAATGGTAGCAGCAGTGGCAGAGTTGGCCTTTCAGTGCATTCAGTGTCCTAAAGAGCTTAGACCTTCCATGAAACAGGTGCTGGAGACCCTTGAGGGTATAAAGAAGGGAACATGGGGATTCAACCAGATAACTTAG 3429 0.3844 MPSVMRIVSRDGSRYPMNRDGNIGIGWKWNKVEFGATYTNMATLLKYSYRKGRPVTMTTREPNHEPRVIEHNSTQPKRQATKRRERGNATESKQSNDYQGQESDKTLEEIFVCWPTKRKVIYQIRGRSYEKTLAVLEVMPYRACELKDYEKDQACGSATSLSNSNHRKRFTNITLSTPDEISNHPQQFSSDFGFQFHTFSYEELLIATKHFASSGILGKGSFGIVYHGKLQDGRQIAVKSLRENNDKKVQQFVNEIEVLSKLSHQNLVPFYGYCHRHDHELMLVFEFVSNGTLADHLHGKRKKQGTLVPWHTRLNIAIEAASALAYLHNSGIIHRDIKSSNILLDDNLCVKVADFGLSRTLPLVVSTSKEAATFASHASTAPQGTNGYIDPDYFQFHRVCDKSDTYSFGVVLAEIISSLPAVDDTWNPYEVPLLSHLAMNKIQNEALHELVDPCLGFQPDNEIGESITAVAELAFQCLQCPKELRPSMKQKIGVTISFSNFLLPRNNDLMRLRCDLLQCCFTGTSSNGVIQIKGKIFPYLILAQATNNFNKRNCLGKIGLKNLYYGKLRDGCEIVIERVSSNDKRQIFQQFLNEILVSNILDHKNLVTFRGYAFHHEEFLVAHEYLSNGTLAAYLECEIQHNKCTLPLLTRMEIAIDIANALSYLHKHGIIHHNINSSNILLDKNMCAKVAGLHLSRKLPEDVSVNATSIVSISSGIAKNCVYIDPEYVSHGRVSTKNDVYSFGVVLCDLISSKLAKYWEGCDRESIAALLGRNIENQALDKVLDPRTGFQSDHKIMQVMTAMAELALNCMGFPQEQRPNMEQVLDILNGKRLERYKTIEAFRIFDYADLRKATMQFHPDRILGEGGFGSVFYGKLQDGLEVAIKRFHNMRENSLKQFMNEIEILRLLHHRNLVSLYGRSSGEHNELFLVYEYVPNGTVSRHIHGGKIEKLPWLTRLNIAIETATALAYLHDSGIIHRDVKGSNILLDENFSVKVADFGLSRSQPDYVTHVSTAPAGTNAYMDPEYFQTGRVSYRSDVYSFGVVLFELISSKPAFWRDVPHGEAVGLAKFAIIKLLNNTLKELVDPDIGYDSDKDVTEMVAAVAELAFQCIQCPKELRPSMKQVLETLEGIKKGTWGFNQIT 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02670 1142 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 530 836 IPR044652 -
Adu05g02670 1142 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 837 1134 IPR044652 -
Adu05g02670 1142 ProSitePatterns Serine/Threonine protein kinases active-site signature. 975 987 IPR008271 GO:0004672|GO:0006468
Adu05g02670 1142 Gene3D Transferase(Phosphotransferase) domain 1 934 1136 - -
Adu05g02670 1142 Gene3D Transferase(Phosphotransferase) domain 1 626 841 - -
Adu05g02670 1142 Gene3D Transferase(Phosphotransferase) domain 1 288 499 - -
Adu05g02670 1142 Gene3D Phosphorylase Kinase; domain 1 524 625 - -
Adu05g02670 1142 Gene3D Phosphorylase Kinase; domain 1 183 287 - -
Adu05g02670 1142 SUPERFAMILY Protein kinase-like (PK-like) 527 831 IPR011009 -
Adu05g02670 1142 SUPERFAMILY Protein kinase-like (PK-like) 187 490 IPR011009 -
Adu05g02670 1142 MobiDBLite consensus disorder prediction 57 91 - -
Adu05g02670 1142 ProSiteProfiles Protein kinase domain profile. 857 1131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02670 1142 ProSiteProfiles Protein kinase domain profile. 549 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02670 1142 MobiDBLite consensus disorder prediction 56 101 - -
Adu05g02670 1142 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 530 836 - -
Adu05g02670 1142 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 154 490 - -
Adu05g02670 1142 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 154 490 IPR044652 -
Adu05g02670 1142 Pfam Protein kinase domain 858 1126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02670 1142 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 837 1134 - -
Adu05g02670 1142 SMART serkin_6 857 1126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02670 1142 SMART serkin_6 211 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02670 1142 SMART serkin_6 549 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02670 1142 SUPERFAMILY Protein kinase-like (PK-like) 839 1132 IPR011009 -
Adu05g02670 1142 Pfam Protein tyrosine and serine/threonine kinase 570 827 IPR001245 GO:0004672|GO:0006468
Adu05g02670 1142 Pfam Protein tyrosine and serine/threonine kinase 216 451 IPR001245 GO:0004672|GO:0006468
Adu05g02670 1142 ProSitePatterns Protein kinases ATP-binding region signature. 863 885 IPR017441 GO:0005524
Adu05g02670 1142 Gene3D Phosphorylase Kinase; domain 1 842 933 - -
Adu05g02670 1142 ProSitePatterns Serine/Threonine protein kinases active-site signature. 332 344 IPR008271 GO:0004672|GO:0006468
Adu05g02670 1142 ProSitePatterns Protein kinases ATP-binding region signature. 217 239 IPR017441 GO:0005524
Adu05g02670 1142 CDD STKc_IRAK 863 1131 - -
Adu05g02670 1142 ProSiteProfiles Protein kinase domain profile. 211 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02670 Adu-Chr5 93749523 93760445 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02670 532 859 Receptor kinase-like Gene Family AT1G25390 38.182 6.88e-55 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Adu05g02670 Pkinase 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02670 - - gsj:114418636 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g02670 05 93749523 93760445 Adu05g02670 05 93749523 93760445 ECH