Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02648 ATGTCTCTTGATTGTGTCACTCAAATGCAGCAATATCCATCACTTATTGAAGAAGCAACACCAACACCAGCAAAAACTCAAATAATTCCATGTGAGAGACCTTCTTGTATGATGAATGGTGCAAGTTCAAATTGTGTGGATTACTCAGATTATGAAAACAACAACAACAATAATGGATCATCATGCATGTCCTTCACAGAGTCAACAAATATGGCAAACATGGTTCAGTTTGAGGCTTTAGATAACATCACTAATGCATATGACATGGATGCACTCAACATCGATATGGAATGCCAAGTGTCACATAACAATTGGCTAGACAAGGATTTTCGGATCTATCAGGAGGAGCTTCTACCCTTAAGAGTTGCAAAGATGTACACTTTCAGGAAGAAGATCCACAAAGATAAGGATGTTGAGCCAACTGAATTCGAAGAGTCTATTGGACAGGCTTTGTTTGATCTTGAAAATACCAATACGGAGCTGAAAAGCGAACTGAAAGATTTATACATAAATTCAGCTGTTCAAGTTGATGTGTCTGGGGGTCGAAAGGCTGTTGTTATCCACGTTCCCTTCAGATTAAGGAAAGGTTTCCGGAAGATTCATGTTAGACTTGTTAGAGAGCTTGAGAAGAAGTTCAGTGGCAAGGATGTAGTGTTGATTGCCACCCGCAGGATAGTGAGGCCGCCAAAGAAAGGATCTGCAGTTCAGCGCCCTCGCAACCGTACACTCACTGCTGTGCATGAGGCAATGCTTGAGGATATTGTATTGCCGGCTGAGATCGTTGGGAAGCGTGTTAGGTATCGTGTTGATGGGTCGACAATCATGAAGGTTTTCTTGGATCCCAAGGAACGAAACAACACTGAGTACAAGTTGGAGACTTTTGCTGCAGTATACAGGAAACTTTCAGGCAAAGATGTGGTGTTTGATTACCCTGCACAAGAGGCTTAG 948 0.4209 MSLDCVTQMQQYPSLIEEATPTPAKTQIIPCERPSCMMNGASSNCVDYSDYENNNNNNGSSCMSFTESTNMANMVQFEALDNITNAYDMDALNIDMECQVSHNNWLDKDFRIYQEELLPLRVAKMYTFRKKIHKDKDVEPTEFEESIGQALFDLENTNTELKSELKDLYINSAVQVDVSGGRKAVVIHVPFRLRKGFRKIHVRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRNRTLTAVHEAMLEDIVLPAEIVGKRVRYRVDGSTIMKVFLDPKERNNTEYKLETFAAVYRKLSGKDVVFDYPAQEA 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02648 315 Pfam Ribosomal protein S7e 131 310 IPR000554 GO:0003735|GO:0005840|GO:0006412
Adu05g02648 315 Coils Coil 151 171 - -
Adu05g02648 315 PANTHER 40S RIBOSOMAL PROTEIN S7 87 314 IPR000554 GO:0003735|GO:0005840|GO:0006412
Adu05g02648 315 PANTHER 40S RIBOSOMAL PROTEIN S7 87 314 - -
Adu05g02648 315 ProSitePatterns Ribosomal protein S7e signature. 203 216 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02648 Adu-Chr5 93269900 93276399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02648 125 315 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 76.963 2.78e-111 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02648 K02993 - gmx:100527642 351.288