Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02647 ATGTCTTTTTCTTCAAAGAGCAATAATAAAAACATTATTAGCTGCTCTAGTGAAGATGATAATAATAATAAGGATAATGAACTTAGAAGAGGACCTTGGACCCATGAAGAGGATGATCTTCTCAAAATGTGCATTGCCATTCATGGTGAAGGAAGATGGAATTTTCTGGCCAAATCTTCAGCAGGGTTAAAAAGAACAGGGAAGAGTTGCAGATTAAGGTGGCTTAATTATCTAAAGCCAGATGTGAAAAGAGGAAATTTAACCCCACAAGAAAAGCTTTTGATTTTTGAACTCCACTCAAAGTGGGGCGACAGGTGA 318 0.3711 MSFSSKSNNKNIISCSSEDDNNNKDNELRRGPWTHEEDDLLKMCIAIHGEGRWNFLAKSSAGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEKLLIFELHSKWGDR 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02647 105 MobiDBLite consensus disorder prediction 1 19 - -
Adu05g02647 105 SMART sant 29 80 IPR001005 -
Adu05g02647 105 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 82 IPR017930 -
Adu05g02647 105 PANTHER TRANSCRIPTION FACTOR MYB21-LIKE 14 105 - -
Adu05g02647 105 MobiDBLite consensus disorder prediction 1 32 - -
Adu05g02647 105 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 14 105 IPR044676 GO:0003700|GO:0006355|GO:0043565
Adu05g02647 105 CDD SANT 32 78 IPR001005 -
Adu05g02647 105 Pfam Myb-like DNA-binding domain 30 78 IPR001005 -
Adu05g02647 105 SUPERFAMILY Homeodomain-like 31 105 IPR009057 -
Adu05g02647 105 Gene3D - 21 84 - -
Adu05g02647 105 ProSiteProfiles Myb-like domain profile. 25 78 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02647 Adu-Chr5 93268428 93269716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02647 25 105 MYB Transcription Factor Family AT1G68320 77.778 2.93e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu05g02647 Myb_DNA-binding 4.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02647 K09422 - adu:107490356 199.134