Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02621 ATGCAATCACTTCCATCAGAGTCCCAAACAGCACAGTCCAACCTTTTCCATCATGCTAAGATCATTAGATTAAAAAACAAGGGTCTTTGGTTTGAAATTTTGAGTGATTCTGGTCTTAAAGGAATGAAATGCAAGAGAGGAACAGAAGGAAATTTGAACATTATGAGGAGAATTAGAATAATTTATAGTGACCCATATGCAACAGATTGTTCAAGCGAAGAAGATGACAATTTTTTGAGCAATCACTATGAACAACATGGTCCTAAGAGATTCATCAGAGAAATCTTGGTTCCATGCATGCCAACCGAATCGTATGAAGTGGATGATGATGATTCTTTACAACAAGGTATCAGCATTGACAAAATCAAACCATGTCTTAACCTTTTGCGAAACCATAGGAGCCGGAGATCATCCAGCAAGTACAGAGGTGTTCAAAGAAGGAAATGGGGGAAGTATGTGGCAGAAATCCGAGACCCCATCCGAGGCGTGCGAGTGTGGCTTGGTACTTTCAATACGGAGGAAGAAGCTGCCATCGCTTATGAGAAGAAGAGAATTGAATTTGTGAACTCATTGCTGGCTTTGAGGAGAATGGTTGGTGTATTGGACTTAGAAGATGGCAATCAAGTGTTGTCTCATCCATCCCCAGCATCCGTGCTTGATGTCGCGGCGACAAGAGCATCATCTGATAATGATAGCAATGGTCCAGTTGTTGAAGGAAAGGACAATGTGGAAACAAGTGCTATTGAAGGTGTAATGGAACCTGTTCATGCGGAAGATCATCATTCATTTCAGCATTTGCTTGAGGAGTCAATTGTGCAATCACTGCTTGGGTATGAATTTGATAGTTTCTTGGTCAATGACAATGGTGGCTGTGCTATGTGGGATGTGAAAGATGGTGAAGGTAGCAGCACTCTTCCACATATTGAAACTGCTTTTGATGATTCAGAGTTGACTTGGTTTGATGAAACTCTGAATTTGTAA 981 0.4108 MQSLPSESQTAQSNLFHHAKIIRLKNKGLWFEILSDSGLKGMKCKRGTEGNLNIMRRIRIIYSDPYATDCSSEEDDNFLSNHYEQHGPKRFIREILVPCMPTESYEVDDDDSLQQGISIDKIKPCLNLLRNHRSRRSSSKYRGVQRRKWGKYVAEIRDPIRGVRVWLGTFNTEEEAAIAYEKKRIEFVNSLLALRRMVGVLDLEDGNQVLSHPSPASVLDVAATRASSDNDSNGPVVEGKDNVETSAIEGVMEPVHAEDHHSFQHLLEESIVQSLLGYEFDSFLVNDNGGCAMWDVKDGEGSSTLPHIETAFDDSELTWFDETLNL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02621 326 Pfam AP2 domain 139 187 IPR001471 GO:0003700|GO:0006355
Adu05g02621 326 CDD AP2 140 187 IPR001471 GO:0003700|GO:0006355
Adu05g02621 326 ProSiteProfiles AP2/ERF domain profile. 140 204 IPR001471 GO:0003700|GO:0006355
Adu05g02621 326 PRINTS Ethylene responsive element binding protein signature 163 179 IPR001471 GO:0003700|GO:0006355
Adu05g02621 326 PRINTS Ethylene responsive element binding protein signature 141 152 IPR001471 GO:0003700|GO:0006355
Adu05g02621 326 SUPERFAMILY DNA-binding domain 139 189 IPR016177 GO:0003677
Adu05g02621 326 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 41 325 - -
Adu05g02621 326 Gene3D AP2/ERF domain 139 191 IPR036955 GO:0003700|GO:0006355
Adu05g02621 326 SMART rav1_2 140 194 IPR001471 GO:0003700|GO:0006355
Adu05g02621 326 PANTHER - 41 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02621 Adu-Chr5 92792440 92793604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02621 43 187 AP2-EREBP Transcription Factor Family AT1G68550 35.849 2.97e-22 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Adu05g02621 AP2 1.7e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02621 - - aip:107642108 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g02621 05 92792440 92793604 Adu05g02621 05 92792440 92793604 ECH