Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02600 ATGGCTGCTAAGAGTTTACATTGTGTTGCCATTGCATATAGAACATTTGAAAAGGAGAATGTTCTAGCCACTGAAGAAGAACGGGCTCACTGGTCTTTACCAGAAGATAATCTTGTTTTGTTAGCTATTGTTGGTCTGAAGGCAAATTCAGTGGAGCTTTGCCAAAAATATGCGGTTAAGGTTGTGAGATGGGGACGTTCTGTGTATGTAAATATTCAAAAATTTATCCACTTTCAACTTACAGTAAATGTAGCAGCTCTTGTTATAAATGTTGTTGTTGTTTCCTCTGGTGATGTCCCACTGAATGCAGTACAGCTTTTGTGGGTAAATCTTATCATGGATACTTTGAGAACACTAGCAATGGCAACTGAACCACCAACTGATCACCTTATGGATCGGCCTCCAGTGGGCCGAAAGTCGGAACTTCAGTTTCTCTAA 438 0.4018 MAAKSLHCVAIAYRTFEKENVLATEEERAHWSLPEDNLVLLAIVGLKANSVELCQKYAVKVVRWGRSVYVNIQKFIHFQLTVNVAALVINVVVVSSGDVPLNAVQLLWVNLIMDTLRTLAMATEPPTDHLMDRPPVGRKSELQFL 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02600 145 Pfam Cation transporting ATPase, C-terminus 99 141 IPR006068 -
Adu05g02600 145 PANTHER CALCIUM-TRANSPORTING ATPASE 58 142 - -
Adu05g02600 145 Gene3D - 43 143 - -
Adu05g02600 145 PANTHER CATION TRANSPORTING ATPASE 58 142 - -
Adu05g02600 145 SUPERFAMILY Calcium ATPase, transmembrane domain M 65 140 IPR023298 -
Adu05g02600 145 PANTHER CALCIUM-TRANSPORTING ATPASE 1 48 - -
Adu05g02600 145 PANTHER CATION TRANSPORTING ATPASE 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02600 Adu-Chr5 92357556 92358714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02600 1 61 Primary Pumps ATPases AT5G57110 52.941 8.64e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02600 K01537 - qsu:112017483 122.864