Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02587 ATGACAGAAACAAAGTCAACTAGCAAGATTTCCAAGAAACAGGATTCGAAAAAATATTCTGCTCCTAGCAATCAGCTTTCAAGGAAACAACATCGAAAGGGTGAAAACCCTACTCGATTCATTCCAACCTCCGACCCACCTTCTGATTTTGGACATTCTGACTCGTGGATCTGTAAGAATTCGGCTTGTAGAGCAGTTCTGTCTAAAGATGATACATTTTGTAGAAGATGTTCTTGCTGTATTTGCCACCTTTTCGATGATAACAAGGACCCTAGTCTTTGGTTGGTTTGCACATCCGACTCAGCCCAAGGTGATTCCTGTGGTATGTCTTGCCACATCGAGTGTGCTCTTCAGCATGAAAAAGTGGGAGTAGTTGATCATGGGCAACTGATGCAACTAGATGGCAGTTATTGTTGTGCATCCTGCGGCAAAGTTACCGGGATACTTGGATGTTGGAAGAAGCAGCTAAATATAGCAAAAGATGCTCGGCGTTTAGATGTGCTGTGTTACCGGATATATTTGAGCTTCAGGCTTCTGAATGGAAGTTTAAGATTTAAACAACTTCATGAAATTGTACAAGAGGCGAAGGCTAAATTAGAAACGGAAGTTGGTCCAGTTAATGGGGTTTCTTCCAAGATGGCACGCGGCATTGTCAGCAGACTCCCTATTGCCGGTGATGTACAGAAACTCTGCTCTCTTGCTATTGGGAAAGCTGATGAATGGTTGGCCACTGTTCCCAGTTCAAATCCAGAATCCGGAGAGGGCTCCCTTCCCGCGGCCTGCAAGTTTGTTTTCGAAGAGGTAACAGCTTCATCAGTCAAAATAATTTTGATTGGAATATCAAATGCGTCTTCCGAGGAAATTAAGGGTTACAAGCTCTGGTATTACAAGAGTAGGGAGGAATCACACACAAAAGATCCTGTTTGTGTCTTTCCGAAAGCTCAGAGGAGGATTTTGATATCTGATCTCCAGCCATGCACAGAATATACTTTTAGGATTATATCTTATACCGATAAGGGCGATTTAGGTCATTCTGAGGCCAAGTGTTTCACCAAGAGCATAGAGATATTGGAAAAAAGTCCGTCTTCATCGGTTGCCATCGGCCGCAAGAAGGAGAGCCTTCAAACTGGAGACAATTCTTTTGGATCCAAAACGGAGCCGAGTTCTTCAATGGTTGATTCTGGATTTAAAGTTCGAGACCTTGGAAAACTTTTGCATCTTGCCTGGGCTCAAGAACCACGAGGCCTCGATTTAAATGTTGCTTCGGTGCCTGATTTAAATGAAGAACTTACACCTCCTTTCGAGTCTTCCAGGGACGAAGATAATGGTTGCACTTTGCAGCAGGCAGTTGAGCCGGACGACGATGCAGCCTCTCATGATCTCGAAAAAAACTGTTTGGCAGGGTCGGATGGTAGTGGTGATTCCCAAATCTGGACACAAGGGCCGACCGGAGAAGTCCCGGCTGTTGACTCTCGTGTAGATGCATGCAAGAAAAGGTTAGCAAGCTCGAACGAAGAGGCGCATGATTGTGACAGCACTCTGATGAATGGATCTCCTTTGCACATAGCGGATGGTTCGTTCTCATTGGACGAGAACTTCGAATATTGTGTGAAAGTGATTCGTTGGCTAGAATGCCAGGGTCATATTAAACAGGAGTTTCGGTTGAAGTTGCTGACATGGTTCAGTTTGAGGTCGACGGAGCAAGAACGTAGGGTGGTTAACACGTTCATTCAGACTCTGATCGATGATCCGAGTAGTTTGGCCGGGCAACTCGTCGACTCATTCTCCGATATTATATCAATCAAGAGGGCAAGAAATGGGTTGTGTATCAAAGCTGTGGGATCAAATTAA 1851 0.4468 MTETKSTSKISKKQDSKKYSAPSNQLSRKQHRKGENPTRFIPTSDPPSDFGHSDSWICKNSACRAVLSKDDTFCRRCSCCICHLFDDNKDPSLWLVCTSDSAQGDSCGMSCHIECALQHEKVGVVDHGQLMQLDGSYCCASCGKVTGILGCWKKQLNIAKDARRLDVLCYRIYLSFRLLNGSLRFKQLHEIVQEAKAKLETEVGPVNGVSSKMARGIVSRLPIAGDVQKLCSLAIGKADEWLATVPSSNPESGEGSLPAACKFVFEEVTASSVKIILIGISNASSEEIKGYKLWYYKSREESHTKDPVCVFPKAQRRILISDLQPCTEYTFRIISYTDKGDLGHSEAKCFTKSIEILEKSPSSSVAIGRKKESLQTGDNSFGSKTEPSSSMVDSGFKVRDLGKLLHLAWAQEPRGLDLNVASVPDLNEELTPPFESSRDEDNGCTLQQAVEPDDDAASHDLEKNCLAGSDGSGDSQIWTQGPTGEVPAVDSRVDACKKRLASSNEEAHDCDSTLMNGSPLHIADGSFSLDENFEYCVKVIRWLECQGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDSFSDIISIKRARNGLCIKAVGSN 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02587 616 CDD PHD_VIN3_plant 78 142 - -
Adu05g02587 616 Pfam PHD - plant homeodomain finger protein 58 176 IPR032881 -
Adu05g02587 616 SUPERFAMILY Fibronectin type III 265 346 IPR036116 GO:0005515
Adu05g02587 616 MobiDBLite consensus disorder prediction 367 392 - -
Adu05g02587 616 MobiDBLite consensus disorder prediction 1 16 - -
Adu05g02587 616 Gene3D Immunoglobulins 242 354 IPR013783 -
Adu05g02587 616 ProSiteProfiles Fibronectin type-III domain profile. 257 356 IPR003961 GO:0005515
Adu05g02587 616 MobiDBLite consensus disorder prediction 1 49 - -
Adu05g02587 616 PANTHER VIN3-LIKE PROTEIN 2-RELATED 412 611 IPR044514 GO:0010048|GO:0040029
Adu05g02587 616 PANTHER VIN3-LIKE PROTEIN 2-RELATED 4 412 IPR044514 GO:0010048|GO:0040029
Adu05g02587 616 CDD FN3 262 341 IPR003961 GO:0005515
Adu05g02587 616 Pfam Fibronectin type III domain 264 343 IPR003961 GO:0005515
Adu05g02587 616 PANTHER VIN3-LIKE PROTEIN 1 4 412 - -
Adu05g02587 616 PANTHER VIN3-LIKE PROTEIN 1 412 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02587 Adu-Chr5 92075101 92082955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02587 55 608 PHD Gene Family AT3G24440 48.653 1.48e-179 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02587 - - gsj:114418583 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g02587 05 92075101 92082955 Adu05g02587 05 92075101 92082955 ECH
Adu03g01952 03 34928776 34934882 Adu05g02587 05 92075101 92082955 PCT