Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02583 ATGGCGAGTAGGCTGAAGGAAGATGAGAAGAACGAGCGCGTAATTCGCGGTCTTCTCAAGCTTGAACCGAATCGAAGATGCATTAACTGCAACAGCTTGGGACCACAATATGTCTGCACAAATTTCTGGACGTTTGTTTGCACAAACTGTAGTGGAATACACCGCGAATTCACCCATAGGGTTAAATCAATTTCAATGGCTAAATTTACTTCACAAGAAGTAAATGCTCTTCAAGGAGGAGGAAATCAGCGTGCAAAAGAAATTTATTTTAAAGAATGGGATGCACAACGTAATTCTTTCCCTGATAGCAGTAATGTTGATCGGCTCCGGGACTTTATTAAGCATGTTTATGTGGATAGAAGATTTACTGGAGAGAGGGCTAACGACAAACCACCAAGAGGAAAGGGTGACAATGATATCTATGAAAACAGGAGAAATGACATGTATCAGGGAGGGTCTAGAAGCCCTCCGTACGAGGACACATATGAGCGGCGTTATAGTGACAGGTCTAGTTCAGGTGGAAGAAGTCCTGGATATGATCAAGAAAGTAGGCAATATGGTGACTATGGGAGGAGTCCTGGTCGTCCTCCAATAGTCAATGATTGGCGTCGTGAAGATCGTAGAGTATCTGATGGGGATTATAAGGTAGAAAATCAATCTCCTGATCGAGCCAGAGATGTTGGTTCTTCCAGTCCACCTGTGGTCCGACCTGTCAGAGAGATATTGGGGGAAAACGTAGTACCTCTTCGGATAAATGAACCCCCCAAACCAAACAGTGGTAAAGCTGCAGATGGCTCTGTGTTGACACAGCGAACCGCATCTTCCAGTAGCTTGGCGTCCAGCAATGGGAATCCAGTGGATGTTAAGCTTGAGATTACAAAGAGCCTTATTGATTTCGATGCTGATCCTGAACCACCTGTTGCTCCGGCAATTCCTCCAGCCCAACAAACTAATGTGTCTCAACCTGTTGTGCAGCCAGAAAAATCCAGTGCTGATAATTGGGCCTCTTTTGATGTTGCTTCTCGAGCTACAGCAAATTCAACTCCAAGCCCTGTGAATGTAAATCCACTTGAATCTGTGTTGTCGCAATTGTCAGTGCCAGCTTCTTTACCTGCACATCTTTCTGGAGTCCAAGCTGGCCCAACTGTTGCAACAGCCATTCCTGCGGGCAATGCGACAACACCTGCAAGTGTCGGCGGTTTCTCAGCTTTTCCACTGAGTGGTTCTTCAGGACCATCTCCTGGACTGGCAACAGCACTGCCTCCTAGTAATGCAGGACAGTGGACTGGTCTGCAGCATCAGCAACCATTGTTTCAAGCTAATGCTACCCATTCCACACAACAATATAAACCACCTGTAGGTGGAGCTGTAAACAATCAGCCATGGAATATATCCTCTGTGCCGACAGTTCAAGGGCATCAAAATACACCAATGCCACATGCATACCATGATGCTATAAACCCTGCCAATACAATCAGTGTTGTTTCACAACCTTCCACTGAAGTAAAATCAATTGGAAGAAAAGAACTTCCTGAGGATCTATTCACTGTGAAATACCCATCCTATCCTGCGCCGGTTCCAGGTTGGCAAATGGGTCTTCCCCATGGCATGGGTCTTCCCCGTGGCATGGGTGTCTCAGTGCAATATAATAATGTGGTGCCCATGCCAAATTTTCCGCAGCAATCAAAATCTGTCAATCCATTTGATGCCGGCGGTGAATCTCCCCAAGTTCAAGCACCAACTTTTCCTTCCATGTCATCTTTGCATGGTGCTCTGCCTAGTATGCCACCTTCAGGAGCAATTCATCCTGCAAGCCTGGGTAATCCATCACACGCCTGGAACCCGCCCCTGTCATCATCATATGTATCTGTCCTTCCTGGACAAGCACAAACTCATCCATCAGCTACGGGAGCAAGGAATTACATTGTACAACAAATGCCACCACCTAACTTGCCAATGCCAAGGCCAGAAGCTAGTAGTTTCGGAACTGGAGGAGCTGTTTTCGGCTTGTCAAATCCAGATCAGCAGCTAACTAATTCATTCTCCACCACTCCTGCCTCTACTCCCTTCCCTGCAGGGGGGAACCCATTCGGCTGA 2097 0.4673 MASRLKEDEKNERVIRGLLKLEPNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSISMAKFTSQEVNALQGGGNQRAKEIYFKEWDAQRNSFPDSSNVDRLRDFIKHVYVDRRFTGERANDKPPRGKGDNDIYENRRNDMYQGGSRSPPYEDTYERRYSDRSSSGGRSPGYDQESRQYGDYGRSPGRPPIVNDWRREDRRVSDGDYKVENQSPDRARDVGSSSPPVVRPVREILGENVVPLRINEPPKPNSGKAADGSVLTQRTASSSSLASSNGNPVDVKLEITKSLIDFDADPEPPVAPAIPPAQQTNVSQPVVQPEKSSADNWASFDVASRATANSTPSPVNVNPLESVLSQLSVPASLPAHLSGVQAGPTVATAIPAGNATTPASVGGFSAFPLSGSSGPSPGLATALPPSNAGQWTGLQHQQPLFQANATHSTQQYKPPVGGAVNNQPWNISSVPTVQGHQNTPMPHAYHDAINPANTISVVSQPSTEVKSIGRKELPEDLFTVKYPSYPAPVPGWQMGLPHGMGLPRGMGVSVQYNNVVPMPNFPQQSKSVNPFDAGGESPQVQAPTFPSMSSLHGALPSMPPSGAIHPASLGNPSHAWNPPLSSSYVSVLPGQAQTHPSATGARNYIVQQMPPPNLPMPRPEASSFGTGGAVFGLSNPDQQLTNSFSTTPASTPFPAGGNPFG 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02583 698 Pfam Putative GTPase activating protein for Arf 13 124 IPR001164 GO:0005096
Adu05g02583 698 MobiDBLite consensus disorder prediction 124 285 - -
Adu05g02583 698 MobiDBLite consensus disorder prediction 198 222 - -
Adu05g02583 698 CDD ArfGap_AGFG 12 122 - -
Adu05g02583 698 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Adu05g02583 698 MobiDBLite consensus disorder prediction 263 285 - -
Adu05g02583 698 PANTHER ARF GTPASE ACTIVATOR 1 698 - -
Adu05g02583 698 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Adu05g02583 698 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Adu05g02583 698 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Adu05g02583 698 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Adu05g02583 698 MobiDBLite consensus disorder prediction 313 331 - -
Adu05g02583 698 PANTHER ARFGAP/RECO-RELATED 1 698 IPR044820 GO:0005096
Adu05g02583 698 MobiDBLite consensus disorder prediction 408 429 - -
Adu05g02583 698 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Adu05g02583 698 MobiDBLite consensus disorder prediction 644 698 - -
Adu05g02583 698 MobiDBLite consensus disorder prediction 124 144 - -
Adu05g02583 698 MobiDBLite consensus disorder prediction 665 690 - -
Adu05g02583 698 Gene3D Arf GTPase activating protein 2 131 IPR038508 -
Adu05g02583 698 MobiDBLite consensus disorder prediction 300 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02583 Adu-Chr5 91956488 91963717 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02583 12 122 C2H2 Transcription Factor Family AT4G21160 29.839 1.14e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02583 - - gmx:102669541 927.932