Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02581 ATGAGGAAGAAAGAAGCCATAACCATTCACCATTTCCACCTCATTGCCTTGTTTCTGGGCTCACTCACACTCACCCTCTCCTCCTCCTTCGCCGCCGCAACAAGCACCACAAAGCACGAGTTCAATGGAGCACTCACGGAGGCAGAAACCATGTACATCAAGCAGAGGCAGCTTCTCTACTACAGAGACGAGTACGGAGACAGAGGAGAAGATGTTACAGTGGACCCTACCTTGGTCTTTGAGAACAACCGCATCAGAAACGCATACATAGCCTTACAAGCATGGAAGCAAGCTATTGTCTCTGATCCTCTGAATCTCACCGCTAATTGGGTAGGTCCTAAGGTGTGCGACTACACTGGAGTCTTCTGTGCACCTGCACCTGATGACAACAGGACCCGCACCGTTGCCGGCATTGACCTCAACCATGGCGACATTGCTGGTTACCTGCCTGAGGAGCTTGGCTTGCTCACAGATCTTGCTCTCTTCCACATTAACACAAACAGGTTCTGTGGCACACTTCCCCACAAGTTCGACCGTCTCAAGATCCTCTTTGAGTTAGATCTCAGCAACAACCGGTTTGCCGGTAAGTTCCCGGCGGTAGTTCTGCGATTGCCCAAGCTTAAATTTCTAGATCTGAGGTTCAACGAATTTGAAGGCACAGTGCCTTCACAGCTCTTTGATAAAGATCTGGATGCCATTTTCATAAATCATAATCGTTTCGTCTTCGATTTACCGGATAATTTCGGTAATTCGCCTGTGTCGGTAATAGTTTTGGCGAACAACAAGTTCCACGGCTGTGTGCCTTCAAGCATCGGAAACATGTCAAGGCTGAACGAGATTATTCTGATGAATAACGGATTCCGTTATTGTTTTCCGGCAGAGGTAGGGTTGTTGAAGAATCTAACTGTGTTCGATGTGAGCTTTAATCAGCTGGTGGGGCCTTTGCCAGACGCAATTGGTGGAGCGGTGAGCTTGGAGCAACTTAATGTGGCACACAACTTGCTCTCTGGTGTAATTCCGGCTAGTATTTGTTCTCTGCCAAATTTGGAGAACTTTACATATTCTTATAATTTCTTCACGGGTGAGCCACCGAGGTGTTTGGCTCTGCCGGCTTTTGATGATAGGAAGAACTGCTTGCCTGCTAGGCCACTGCAGCGCTCTGCCGCCCAATGCAGGGCCACGCCTTCAGTGAATTGCGGCTCTTTCAGGTGTAAGCCTTTTGTTCCGTCAATTCCTTCTCCGCCTCTTGCTCTTCCTCCTCCGCCGCCACCACCTCCTCCACTATGTATAGAACCACCCCCACCACCACCTCCGCCTCCCCCTTCGCCACCACCATGCGAAGAGCATCCACCACCACAACCATCACCACACCCTGCACCTTACCATCCACCACCATCGCCACACCCTGCACCTTACCATCCACCGCCATCACCATCACCGCCACCAGCACCTGTATATGAAGGGCCCTTGCCACCT 1476 0.5068 MRKKEAITIHHFHLIALFLGSLTLTLSSSFAAATSTTKHEFNGALTEAETMYIKQRQLLYYRDEYGDRGEDVTVDPTLVFENNRIRNAYIALQAWKQAIVSDPLNLTANWVGPKVCDYTGVFCAPAPDDNRTRTVAGIDLNHGDIAGYLPEELGLLTDLALFHINTNRFCGTLPHKFDRLKILFELDLSNNRFAGKFPAVVLRLPKLKFLDLRFNEFEGTVPSQLFDKDLDAIFINHNRFVFDLPDNFGNSPVSVIVLANNKFHGCVPSSIGNMSRLNEIILMNNGFRYCFPAEVGLLKNLTVFDVSFNQLVGPLPDAIGGAVSLEQLNVAHNLLSGVIPASICSLPNLENFTYSYNFFTGEPPRCLALPAFDDRKNCLPARPLQRSAAQCRATPSVNCGSFRCKPFVPSIPSPPLALPPPPPPPPPLCIEPPPPPPPPPPSPPPCEEHPPPQPSPHPAPYHPPPSPHPAPYHPPPSPSPPPAPVYEGPLPP 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02581 492 SUPERFAMILY L domain-like 89 370 - -
Adu05g02581 492 PRINTS Proline rich extensin signature 454 470 - -
Adu05g02581 492 PRINTS Proline rich extensin signature 412 424 - -
Adu05g02581 492 PRINTS Proline rich extensin signature 432 453 - -
Adu05g02581 492 MobiDBLite consensus disorder prediction 418 492 - -
Adu05g02581 492 Gene3D Ribonuclease Inhibitor 89 251 IPR032675 -
Adu05g02581 492 Gene3D Ribonuclease Inhibitor 253 379 IPR032675 -
Adu05g02581 492 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 30 484 - -
Adu05g02581 492 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 30 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02581 Adu-Chr5 91914388 91916384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02581 42 404 Leucine-rich Repeat extension Gene Families AT3G24480 74.317 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02581 - - gmx:106799218 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g02581 05 91914388 91916384 Adu05g02581 05 91914388 91916384 ECH