Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02573 ATGTTTGCGAGAAAAGATGTCCGAGAGTTGGAAAGGACAGAAGCTTCTTTCAAGAGCCGAATTTCATGTCGGTGCCCATGTGATCGAAGTGGTTCTGGCTCCAATAAAACCAATCGATTTGACTTATTGTTTGGTACCTTGGATGGTAGTATAGGTTGCATTGCTCCTCTCGAAGACTACAATAATCATTACAGAGAAAGCTTGTTGATGCCGTACCCCATCTTGCTGGCCTGGCCCCCACAGTATAGTGGACTTGCTCAAATGAAAGAATCACAAAACTTGAAGTTCCTCAACAATATGCATGCATGGTTTCACACTGCTGGAATTCCAGATGGCGTGCTCAATGTAGTACCAGGATTTGGACCCACTGCTGGTGCCACAATATCCTCACACATGAATGTTGATAAGGTTAGCTTCACCGGTTCGACAGAGGTAGGCGGTGAAATAATGCATGCTGCAGCTAGCAGCAACTTGAAACAAGTTTCACTTGAATTAAGAAGAAAGTCACCTCTTCTAATCTTTGATGATGCTGATGTAGATAAAGCTGCTAGCCTTGCTCTCTTGGGCATAGTATATAACAAGGGTGAGATATGTGTTGCAAGTTCACGTGTGTTTGTTCAGGAACGGATATATGATGAATTTGAGAAGAAGTTGGTACAGAAAGCAAAAGCTTGGGTTGTTGGTGATCCTTTTGACCCTAAATCTCAGCAAGGCCCTCAGAAAGAAGGAGCCACCCTTTTATATGGGGGTAAAAGATTAGGAGACAAGGGCTACTACATTGAGCCAACAATTTTCTCTGATGTTAAGGAGGACATGCTTATAGTACAAGATGAAATATTTGGCCCTGTGATGTTACTAATGAAATTCAAGACTATTGAAGAGGCAATTATGAGGGCTAATAACACCAAATATGGGCTAGCAGGAATTGTGACAAAGAATTTGGATATTGCAATTTTGCAAACACAGTGTCCAGATCCATTCGTGCAGGCATTGTTTGGATCAACTGCTATTTCATATTTGGGAGTGACATTCCTTATGGAGGGTATAAGCAGAGTGGATTTGGAAAAGAATATGTACCTGCAACAGAAATCTGTTGTAACTCCAATTTACAACTCTCCTTAG 1122 0.4162 MFARKDVRELERTEASFKSRISCRCPCDRSGSGSNKTNRFDLLFGTLDGSIGCIAPLEDYNNHYRESLLMPYPILLAWPPQYSGLAQMKESQNLKFLNNMHAWFHTAGIPDGVLNVVPGFGPTAGATISSHMNVDKVSFTGSTEVGGEIMHAAASSNLKQVSLELRRKSPLLIFDDADVDKAASLALLGIVYNKGEICVASSRVFVQERIYDEFEKKLVQKAKAWVVGDPFDPKSQQGPQKEGATLLYGGKRLGDKGYYIEPTIFSDVKEDMLIVQDEIFGPVMLLMKFKTIEEAIMRANNTKYGLAGIVTKNLDIAILQTQCPDPFVQALFGSTAISYLGVTFLMEGISRVDLEKNMYLQQKSVVTPIYNSP 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02573 373 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE RF2C 105 373 - -
Adu05g02573 373 SUPERFAMILY ALDH-like 100 318 IPR016161 GO:0016491
Adu05g02573 373 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 191 202 IPR016160 GO:0016491
Adu05g02573 373 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 169 315 IPR016163 GO:0016620
Adu05g02573 373 Pfam Aldehyde dehydrogenase family 102 314 IPR015590 GO:0016491
Adu05g02573 373 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 101 168 IPR016162 GO:0016491
Adu05g02573 373 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 105 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02573 Adu-Chr5 91738195 91740922 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02573 107 373 Aldehyde Dehydrogenase Gene Family AT3G24503 61.301 1.54e-106 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02573 K12355 - gmx:100783920 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01942 03 34503599 34508591 Adu05g02573 05 91738195 91740922 PCT