Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02560 ATGTCAGGTTACTTAGGTAGTGCCTTACTAGAAATCAAACCCGATCCTTCATCCTCTATTCTCTTTGGTGGCTACGGTGTATGGTTCTCTCTTCATATCATTGACGGCGCCAACCTCCTCTATCAGACCATCCAAGCGACGCTCCATCCTCCAGTAAAAGTATACGCTCCCGATTATTCACCCTATCTCCCTCTCGGCGGCTACGGTCCATGGTTCGCTCTTGATTACATCAACGGCGCCAACCTCCTCCAATCAACCATCCAAGAGAAGGGTGCGGTGCAACACTTTCGGAAGAGAACATCTTCCATGGCATTTTCAACCCCGGAAGGCGGATCGATTAGTACATTGATCAATCCAACCCAAGGCAATGAACAATTCAGTGTGGGTGAAGTCGACGAAATTACCGACGTCGTTGTGACTAGAAAGGATGAGTTGGACTCGGGACACGAGTTGTCGGATCATAGTGGGGTCGGTGAAGAGAAATTTCCAGTCATAGGAATGAGTTTTGGTTCGTTGTCTCTCGCACAGAAATTTTATGCAAACTATGCAAAGAAAGTTGGGCTCGTTACTAAAATCAGGAACATGAATTTCAACAAAACGCGAAAGAAATCAAAGATACTGGTTAATCAATCTATTTACTGCACGCGAGAAGGTTATCGAGAGTGTAGGGTGAACGCAGCAACTCGAGCAAACAGAATTATAGCCATGAGATGCAGAGCAACAATGTATGTTATGCTGGACAAGGAGAAGGAAAGTTGGGTTGTGTCTAGATTAGAATTGAGGCATTCTCATCCCTGTTCGGCTAAGAAAGCTGTCCACTATCATGAGTACCAAGAGTTGaccatgcatgctaaTAACGAGCTACTATATTCTTCCTCGCTGGCTCGGAGTGACGAAAGCAACAACTTGTTCAGGCATCTGTGTTCAGAGTTCTATAACGTTGCTCAGGAGTTTTTTGCTTGTGATGAGGAAGCAGCCATCTTGCCAGCTACCCTTTGGGATACAATGTCCAAGCTGACTGATTACCGTGCCAGCATGCGTTCCACTACTGTTGCTGCAACTCAGAATACCATGCCCTCACAGAGCACAGGTGGTGTTATTATACATGACATACAAGGACTCTCAAGAGTCAAAACCAAAGGACGGCCAAGAGTAAGAGACTTGGAACAGAGTTGGACAAGTCAATTAAGAAGTCAATGCAAAAAAGGAAGAGAAAATCACATCCGGTATGTGTTAAAAGCGACGTATATTTTAAATTTTGCTTATGGAATGGTGTTCTTGATTAATGTATGA 1293 0.4401 MSGYLGSALLEIKPDPSSSILFGGYGVWFSLHIIDGANLLYQTIQATLHPPVKVYAPDYSPYLPLGGYGPWFALDYINGANLLQSTIQEKGAVQHFRKRTSSMAFSTPEGGSISTLINPTQGNEQFSVGEVDEITDVVVTRKDELDSGHELSDHSGVGEEKFPVIGMSFGSLSLAQKFYANYAKKVGLVTKIRNMNFNKTRKKSKILVNQSIYCTREGYRECRVNAATRANRIIAMRCRATMYVMLDKEKESWVVSRLELRHSHPCSAKKAVHYHEYQELTMHANNELLYSSSLARSDESNNLFRHLCSEFYNVAQEFFACDEEAAILPATLWDTMSKLTDYRASMRSTTVAATQNTMPSQSTGGVIIHDIQGLSRVKTKGRPRVRDLEQSWTSQLRSQCKKGRENHIRYVLKATYILNFAYGMVFLINV 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02560 430 Pfam FAR1 DNA-binding domain 177 266 IPR004330 -
Adu05g02560 430 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 127 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02560 Adu-Chr5 91446264 91450500 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu05g02560 FAR1 7.4e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02560 - - ahf:112730161 282.337