Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02557 ATGGTGTCGATTAATGGGATGGAGCAGAACAACGTGATCGCACCGTTCGTTATAAAGACATATCACATGGTCAACGATCCGAGCACCGATTACCTTATAGCATGGGGCCCAGCGAACAACAGCTTCATCGTCGTCGACCCTCTCGACTTCTCTCAGTCTCTACTCCCTGCCTTCTTCAAGCACAACAACTTCTCCAGCTTTGTTCGCCAACTCAACACCTATGGTTTCAGAAAGGTGGATCCAGATAAGTGGGAGTTTGCAAACGAGTGGTTTCTGAGAGGGCAGAAGCACTTGCTGAAGAATATAGTTAGGAGGAAGCACGGCACGAGGAGCTATAATTCTTTGCATTTCAACAACCACCACCACGGTGGCAAGCAGCAGATTTTAGCGGCGGAGGAGCTCGACGATGAAGCCATGATGGTGGAGATAGCGAGGCTGAAGGAGGAGCAGAAGGCTTTGGAACAAGAGCTTCAAGGGATGAACAAGAGGTTGGAGACAACCGAGAAGAGACCACAGCAAATGATGGCTTTTCTATGCAAGGTCGTCGAGGATCCCGAGGTTCTATCCAGGGTTCTTCTTGAGAGGGAGACCAGGCAAATCGCCGACAAGAAGCGCCGCCTTATCACGGCTGCGACCTCCTCGTCTTCGTCTTCTGGTGTTGCCGTCAAGACGGAACTCGAGGAGGAGGAACCAACTGTCGGGAATATAATATCTTCTTCGCCGGAAACCGGCTTCGAAATTGATAATTTTTGCCACGTGGCGTCGCCGTCTCCGCCGCAGGAGGCGGCGCCGGTGGCCATGGGGTGGTTGGGGCAGCCGCGGCCGAGGATTGGTCATCACTACCAACAGCAGGGGCATAATGGATATAGAAGTTATAATAACAATTATAATTATAGTTCCGCCGCCACACCAAAGCCGTTGACGGTGGTTCCTCCGACGGCGCCGCCGCAGGGTAATGGCACTGGTGGAGGTAAAGGTCACGTGAACTTTTTTAGTGAAATGGCGGCGGAGAATAGTCCACGGCCACCTTATCCGTTTTCACTATTAGAAGGTGGATTCTAA 1062 0.5179 MVSINGMEQNNVIAPFVIKTYHMVNDPSTDYLIAWGPANNSFIVVDPLDFSQSLLPAFFKHNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKHLLKNIVRRKHGTRSYNSLHFNNHHHGGKQQILAAEELDDEAMMVEIARLKEEQKALEQELQGMNKRLETTEKRPQQMMAFLCKVVEDPEVLSRVLLERETRQIADKKRRLITAATSSSSSSGVAVKTELEEEEPTVGNIISSSPETGFEIDNFCHVASPSPPQEAAPVAMGWLGQPRPRIGHHYQQQGHNGYRSYNNNYNYSSAATPKPLTVVPPTAPPQGNGTGGGKGHVNFFSEMAAENSPRPPYPFSLLEGGF 353
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02557 353 Coils Coil 136 170 - -
Adu05g02557 353 Pfam HSF-type DNA-binding 16 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu05g02557 353 ProSitePatterns HSF-type DNA-binding domain signature. 55 79 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu05g02557 353 SUPERFAMILY "Winged helix" DNA-binding domain 13 105 IPR036390 -
Adu05g02557 353 PANTHER HEAT STRESS TRANSCRIPTION FACTOR C-1 14 347 - -
Adu05g02557 353 PRINTS Heat shock factor (HSF) domain signature 16 39 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu05g02557 353 PRINTS Heat shock factor (HSF) domain signature 54 66 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu05g02557 353 PRINTS Heat shock factor (HSF) domain signature 67 79 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu05g02557 353 Gene3D - 8 106 IPR036388 -
Adu05g02557 353 MobiDBLite consensus disorder prediction 219 238 - -
Adu05g02557 353 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 14 347 IPR027725 -
Adu05g02557 353 SMART hsfneu3 12 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Adu05g02557 Adu-Chr5 91349271 91350716 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02557 12 215 HSF AT3G24520 63.462 2.95e-90 272
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Adu05g02557 HSF_DNA-bind 5e-30 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02557 K09419 - gmx:100794896 383.645
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g02557 05 91349271 91350716 Adu05g02557 05 91349271 91350716 ECH