Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02546 ATGCTCATGTCCAAGGTGGTGCATCGGCGGCGGCACTGCGAGATCTTGCGGCATTCAAAATCCTTGATTTGGAGCGTTTCTAGTGACCCTTTTGCAGGATGGTACGTGTTAGGTGAACGGAGGCGAAGGCGGAGGCAGAGACGGTGGCGATGGTGGCGACGTAGTCCGCCGTCTCGTAGCTCTCCTTCTCCCCCATCTTCCGGCGGCAAAACAACACCTTCGTCCAAGTCACCGTCGTCGTCGTCGTCCCCATCTCCACCGTCGTCGTCTTCTTCTTCAGGCATTTCCACGGGAGTTGTGGTCGGAATCGCCGTTGGTGCTGTGGCAGTTCTTGTGGTACTGAGCGTTCTTTGCATATGCTGTAGGAAGAAGAAGAGAAGACGCGACGAGGAGCAATATTACGGCTACCCACCACCCCAGCCGCCGCCACGTGGACCCAAAGATGACTATGGTGGTCCCCCACGCCAGTGGCAGCACAATGCTCCACCTCCTTCAGATCACGTGGTCTCAGTCCAGCCACCTAAGCCATCGCCTCCGCCTCCGCCTGTGTACCAAGCTCCACCACCACCTCCACCTTTCATGAGCAGCAGTGGCGGTTCTGGATCAAACTATTCAGGTGGTGAGCCACTTCCACCTCCTTCTCCAGGCATAGCATTAGGCTTCTCAAAGAGCACTTTCACATATGAGGAGCTGGCACGAGCAACCGATGGCTTCTCGGACGCCAACCTCCTCGGATCAGGTGGATTCGGGTATGTGCACAGAGGAATTCTTCCCAACGGCAAGGAAGTAGCCGTGAAGCAGCTAAAGGCTGGAAGCGGGCAAGGAGAGCGTGAATTCCAAGCTGAAGTAGAGATAATTAGTCGTGTTCATCACAAACACCTTGTTTCTTTGGTTGGATACTGCATCACCGGGACCCAGAGGCTGCTTGTTTATGAATTTGTTCCCAACAACACGTTGGAATTCCATTTACACGGGAGAGGGCGACCTACGATGGATTGGCCCACAAGACTACGAATTGCTTTAGGATCTGCTAAAGGGCTGTCATATCTTCATGAAGATTGTCATCCTAAGATCATTCATCGCGATATCAAAGCTGCTAACATTCTTCTCGATTTTAAGTTTGAAGCTAAGGTTGCTGATTTCGGGCTTGCAAAGTTCTCTTCTGATGTCAACACTCATGTTTCCACACGAGTGATGGGGACTTTTGGGTATCTGGCTCCGGAATATGCTTCCAGTGGAAAACTCACAGACAAATCAGATGTTTTCTCCTATGGAGTCATGCTTCTCGAGTTAATTACTGGAAGAAGGCCAGTTGATAAAACCCAAACTTTCATGGAGGATAGTTTGGTAGACTGGGCTAGGCCTTTGCTCAACCGGGCATTGGATGAAGATGATTATGACTCTCTAGTTGACCCAAGGCTCCAGAATGAATATGATCCCAATGAGATGGCTCGCATGGTGGCATGTGCCGCTGCTTGCACGCGTCATTCAGCAAAGCGTCGACCAAGGATGAGTCAGGTTGTTCGTGCTCTTGAAGGAGATGTGTCTCTGGCGGATCTTAATGAAGGAATTAAACCTGGACACAGCACCATGTACAGTTCACATGAAAGCTCGGATTATGACACTGCACAGTACAAGGAAGACATGAGAAGGTTCAGGAAAATGGCATTGGGAACCCAGGAGTACGCCAGCAGCGAGTATAGCGCGCCTACAAGCGAGTACGGCCTGTATCCATCCGGCTCAAGCAGTGAAGCACAGAGCCGCCAGACCACCCGCGAAATGGAACTGCGGAAGATGAAGAACAGTCAAGGTTTCAGCGGAACTTCTTGA 1830 0.5142 MLMSKVVHRRRHCEILRHSKSLIWSVSSDPFAGWYVLGERRRRRRQRRWRWWRRSPPSRSSPSPPSSGGKTTPSSKSPSSSSSPSPPSSSSSSGISTGVVVGIAVGAVAVLVVLSVLCICCRKKKRRRDEEQYYGYPPPQPPPRGPKDDYGGPPRQWQHNAPPPSDHVVSVQPPKPSPPPPPVYQAPPPPPPFMSSSGGSGSNYSGGEPLPPPSPGIALGFSKSTFTYEELARATDGFSDANLLGSGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGTQRLLVYEFVPNNTLEFHLHGRGRPTMDWPTRLRIALGSAKGLSYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFSSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSYGVMLLELITGRRPVDKTQTFMEDSLVDWARPLLNRALDEDDYDSLVDPRLQNEYDPNEMARMVACAAACTRHSAKRRPRMSQVVRALEGDVSLADLNEGIKPGHSTMYSSHESSDYDTAQYKEDMRRFRKMALGTQEYASSEYSAPTSEYGLYPSGSSSEAQSRQTTREMELRKMKNSQGFSGTS 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02546 609 SMART serkin_6 238 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02546 609 MobiDBLite consensus disorder prediction 135 149 - -
Adu05g02546 609 MobiDBLite consensus disorder prediction 129 218 - -
Adu05g02546 609 Gene3D Phosphorylase Kinase; domain 1 218 313 - -
Adu05g02546 609 ProSiteProfiles Protein kinase domain profile. 238 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02546 609 ProSitePatterns Protein kinases ATP-binding region signature. 244 266 IPR017441 GO:0005524
Adu05g02546 609 Gene3D Transferase(Phosphotransferase) domain 1 314 522 - -
Adu05g02546 609 Pfam Protein tyrosine and serine/threonine kinase 243 511 IPR001245 GO:0004672|GO:0006468
Adu05g02546 609 MobiDBLite consensus disorder prediction 562 609 - -
Adu05g02546 609 MobiDBLite consensus disorder prediction 562 589 - -
Adu05g02546 609 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 53 593 - -
Adu05g02546 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 358 370 IPR008271 GO:0004672|GO:0006468
Adu05g02546 609 MobiDBLite consensus disorder prediction 64 95 - -
Adu05g02546 609 MobiDBLite consensus disorder prediction 167 195 - -
Adu05g02546 609 MobiDBLite consensus disorder prediction 53 95 - -
Adu05g02546 609 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 53 593 - -
Adu05g02546 609 SUPERFAMILY Protein kinase-like (PK-like) 215 511 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02546 Adu-Chr5 91126482 91132925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02546 62 592 Trihelix Transcription Factor Family AT1G70460 50.562 3.90e-173 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Adu05g02546 PK_Tyr_Ser-Thr 4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02546 - - gmx:100781944 850.892